Transcript Information: R_Transcript_64669.p1


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value2E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.137556139784
Replicate 219.517687710925
Replicate 321.6162171682
Condition 2: 8 Hour
Replicate 119.312794887968
Replicate 222.518352840067
Replicate 319.472502473044
Condition 3: 24 Hour
Replicate 121.826084336198
Replicate 219.570159297273
Replicate 319.010447732751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64669.p1 GENE.R_Transcript_64669~~R_Transcript_64669.p1 ORF type:complete len:426 (+),score=87.69,VPS13_C|PF16909.1|1.9e-40,VPS13_C|PF16909.1|0.012 R_Transcript_64669:240-1517(+)
ATGCTCAAAAAGGGGGGTTTGACATCAGGAGAGTCTTTCATCCATAGGGGTATTATGGCTTTCGCTGATGTTGAGGGGGCACAAATTTCCCTCAGGGAATTGACAATAGCACATCACATGGCTAGTTGGGAATCCATTCAACAAATTCTCTTCAAGCATTATTCTAGGCAATTTCTTCATGAGATGTACAAGGTGTTTGGTTCTGCTGGTGTAATTGGAAATCCTATGGGCTTTGCCAGAAGAGTTGGCCTTGGTGTTAAGGACTTCTTATCAGTTCCAGCAAGGGGAGTTCTGCAGAGTCCCTCTGGGCTGATCTCTGGAATGGCTCAAGGCACTAGTAGCCTGCTTAGCAACACATTGTATGCTATGAGCGACACAGCAACACAATTCAGTAAAGCTGCTCATAAGGGAATTCTTGCTTTTACATTTGATGGTCATGATGCCGCAAAAATGGGAAAGCAAAGGATGGTTGCATCGTCTCAGACAAAAGGTGTAATCAATGAATTGTTAGAGGGATTAACTGGTCTCCTCCAATCTCCCGTCAAAGGAGCTGAGAAGCATGGTCTTCCCGGAGTTCTGTCAGGACTTGCTTTAGGTGTTACTGGGCTTGTCGCTAAACCTGCTGCTAGTGTTCTTGAAGCTACAGGAAGAACTGCACAAAGTATCAGAAACCGGAGTAGGCTTCACAGAATGGGACTCCATCACTTCCGTGTTCGCCTTCCCAGATATTTGAGTGCCGAACTGCCTCTCAGACCCTATTCTTGGGAGGAAGCAATCGGAACAGCTGTGCTCTTGGAGGTTGATGATGGTCTGAAATTTAAAGATGAGGTCCTTGTAATGTGCAAATCACTAAAAGATGCTGGGAAATTTGTTGTGCTCACAGAGAAGCTCATCTTGATCATTGGGTGTTCAAGTCTAGCAGATCTGGGTAAGCCCGAGTTCCGAGGTGTTGTTGCAGAGCCAGAGTGGATAGTAGAAGTTGAAATCGCTTTGGAGAGCGTGATTCATGCTGATGTTGATGGAGAAGTCGTACACATTGTTGGAAGCAATTCAGAAACTCTACATGGCCAAAATCTGCATCACCAAAAGAGAACTGGAGCAAAATTTAAGCGGTGGGATCAATCTCCGACTCCACTTCCACTCTTCCAGACTAACTTGGAATTGTCTTCCAATGAAGATGCAGACTATTTTTTGAGGGTTCTAATGTCCACATTTGAGCAAGGAAAAGAACAAGATTGGGGAAATGTCTATCTTCTTCATAAGAGTAATATAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64669.p1 GENE.R_Transcript_64669~~R_Transcript_64669.p1 ORF type:complete len:426 (+),score=87.69,VPS13_C|PF16909.1|1.9e-40,VPS13_C|PF16909.1|0.012 R_Transcript_64669:240-1517(+)
MLKKGGLTSGESFIHRGIMAFADVEGAQISLRELTIAHHMASWESIQQILFKHYSRQFLHEMYKVFGSAGVIGNPMGFARRVGLGVKDFLSVPARGVLQSPSGLISGMAQGTSSLLSNTLYAMSDTATQFSKAAHKGILAFTFDGHDAAKMGKQRMVASSQTKGVINELLEGLTGLLQSPVKGAEKHGLPGVLSGLALGVTGLVAKPAASVLEATGRTAQSIRNRSRLHRMGLHHFRVRLPRYLSAELPLRPYSWEEAIGTAVLLEVDDGLKFKDEVLVMCKSLKDAGKFVVLTEKLILIIGCSSLADLGKPEFRGVVAEPEWIVEVEIALESVIHADVDGEVVHIVGSNSETLHGQNLHHQKRTGAKFKRWDQSPTPLPLFQTNLELSSNEDADYFLRVLMSTFEQGKEQDWGNVYLLHKSNIK*

Click here to download the sequence:
Link to NCBI Protein BLAST