Transcript Information: R_Transcript_64718.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value3.3E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3134355873216
Replicate 21.7652940477397
Replicate 32.2177223659969
Condition 2: 8 Hour
Replicate 12.2926255714937
Replicate 21.9939639858382
Replicate 33.8037451554824
Condition 3: 24 Hour
Replicate 13.3632456448229
Replicate 23.2310251877916
Replicate 33.7223039180902


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64718.p1 GENE.R_Transcript_64718~~R_Transcript_64718.p1 ORF type:complete len:1570 (+),score=255.61,Urb2|PF10441.5|84,Urb2|PF10441.5|6.4e-38 R_Transcript_64718:1640-6349(+)
ATGCTTGAGAGGGTCTACGTAAGAACGGAGGGTGATTTTGGAGGATCCTGTCTTAATTTTTTAAAGATAATTTATCATTTGTTACTTTCATGTTATGCCAGATTTAATCAACTATGGCAGGCAATATGCCGTCTTGACAGGTCTCCACAGATGGAAATATTGAATTCACTGGCCAAGGAGTTCATTCTTGTAGTTCAGAACTTCTTGGAAATTGAGTATGAAGTCATTGGGGATGACTTGGTTAGTATATGGCTTATGATTCTCAGTTTTTCAGCAATGGCGCATTCTTCAGAAGATGCTTCATTATTTTCAGGGACTGTCAATCTAGGATGCCGGGTATTTGATCTATACAGTGAGCTTCGTCAGGTGAATCATGCTGTTTTTACGCTGTGTAAGGGACTGAGGCACCTAGCATTCTATCAAGGAGACAATGAAATCAAATATTCGGAACTCTTGACACCTAAGGGAATCCTTCATTTTGCTAAATTTGCCAAATCAGGTCGATCATTATTATGCTCTCAAAAGTTTAGGCTGGCCATTTGCAATGCAATCAAATCTATACCTGAAGGGCAGGCCAGTGGATGTGTTCAAACTTTAACAGATGACATCTCAGACTCCTTGGCATGGATGAAAGTTAGTTGTTCAGTGACCGATGAACGTGAATTTGGAGATGCCGTGTCTTGTAGATTCACAATTCAAGCAGAACTTCTTGGAATTGTCTTGTCTGAAATTTATTCTATGGTTCTGGATTCTCTTTCAGTCACTCCTGGTAATAGTTACCTTATGGGAGTTTCTATAAGGAACCTGATAATGGTACTCCATGCCAGCATGATCCATCTAGTTACCCCTGAACAAGATGTTGTTGATGAGTTTCTCTTATCTGTCACGGGAATAACTATTGAAAGGAACAAGGTGAAATGTAATAATGATTTGCAGGATAAGATTCCCTTGGTTATGTTATACTTCTTTCGTTTATATATGTCCTGCCGGAGCTTATGCCGACAAGCAGTCAGCCTCATGCCTCCAGACTCTTCAAGAAAGATTTCAGGCATGATGGCTGACTATTATACGGCATACTCAGGTCAGGATTGCATGGAGAGGGCTGATTTTGAAGATGAGGGTTACTTTTCATGGATTGGTCGACCTTCAGCATCTCTTCTGAGTGTTGTGCAATATATCAGGGACAATTTTCTTCAACAAGTGTCTGCGGATTACTGTTCTTTGATATATGTATTCCATATTATGGCTTTTCAAAGGCTTGTTGATCTCAATAGGCAAATACAATCCGTACAGTATATTGTACAGAGAAACAAAAATGTAATTCATGATGAATTGATGGATGATGCTGACCTGTTGATTCTGCGTGATAACAAAAGGAAGCAGGAGAGATTTTTGTCATATTTGAAGCAAGAAGCCATTGATCTTACTGATTTTATCATGGAATACCTTTCATTAGTCGATAAGAAGCAACTTCAGCTTAGTCGGGAAACCACAAGGAGTCTGTCCCCTCAGCACACGGAAATTGATTCTTGGGATCTGGGTATCTGTACAGTGAATGAGAAGACACTGCCTACTGCTGTTTGGTGGATTATTTGCCAAAATATTGATATATGCAGCAATTATGCTACTAAGAAGAAGTTGAAGTTGTTTCTCTCACTTTTGATCAATAATTCACTTCCATATGGTAGGTGTGGAGGTGTTGAGAAGCAAACTCAGAATGATCTTGGTGAGGGAATTAAAGTTACTAAACATCAAATTGCACAGGAACACCTTCATGACACCACTTTGTATGATCAAAGATTTGTGTGCAGGCATATGGCTGCAAGGATTTGCAATAGTCTGAAGAAGTGTGCATCTTTGTTACTCAAAGGTTTCCCAACCGTTGATGCAGAGTTGAATTCTGCTGATTGGGAACAGGTCTTGAGTGTTACAAATAATTCATCTGTGGCCGAAAGAGACGGGCTACGTACTTCTTATTGTACTTATAGTGACTTGATCAACAGATGTTCCAACACTAAATCATTATCTTCAACTATCAGTTTGCACATTGCTGCATGTCGGAGGTTATTGGATCTTTTGTGCCGTATGAAGGAGAAATTGTTAAGCTTCAAGTCTTTCTCACGTTGTGTGATGTATTTGGTCAACTTTGAAAGGCTTGTAATTAACAGCTTCGTATATCCTCATGGAAAATCATGCTTGCATGAATGCCATCAGCTCCTTGGTCTGTTGGTTTCTTGCCGTAGAGCTCTGAAATATCTGCTTATAGCATTTATCGAGGAGAACGTTGAGTCAAGTAATTTATCAGCCCTTCCTATATTCTCTGGGAGTTCATCACCTCCTTTATGGTTGTTGAAATCTGTTTACTTGGTGGTTGCATGGTGGAGCCCCTTGTCATCAGAACATAGTGGTGAAGTGAATGATATGATCTTCTCTCTGATGGATCACACATCCTATATGTTTTTCACACTAGGCAAACATCAGTTTAGTTTGGCACTTAAATCCATTTTGAGCCCTAAGAGTATAAAAAATTCTTCTTTGCTCTGTGGAGGGGATCATTCAAATGAATCCAATAGTTGCGTAAAATTATTGAACGATGTTGGAACTAGTAAAACTGTCACCGCTACAGTTGAGATGTTGGAGGATCAGATAAAAAGCAGCCTCTCCTCTCTGAGCGACGCGTTTAATAATGGTAATGCTGAGCTTCGTGTACAACTAGCAGATTTGAACAAATTATCGTCTGTAGTTTCTTGCATTCAAGGTTTTCTATGGGGATCGGAGTCTGCTCTTTGTGATCTAAATGCAAGTGGTAATGATTTGAAAGCAAAAATGAGAAAGTGTAAACATAAGACAATATTAGGAATAAAAAGTTTCGTTGAGATATTTGTGGAGTTCCTAAGTGTTTCCTCGCGGATCTTTCTTCATAATGATCAGCCACTCAAAATTTCATGTGACTTTGAAGAGCAGTTGAACTCAGATCGTAACAATGGTGTTCAGGGGACTGAGGCATCCCTAGAGAATCAGGAAGAGAATTCAGTGCCCGGAAAGGTGGGTTTAGCTTCATCTGATGTTCAAGATGATTCTGATACTGGTGGCAAGAAAGAAAGCTTGCAATCTGATAATCCGGATAGTTGCATTGGTGGTCTAACTGACCTTGGCTCCTTTAATTACAACTGTTTGAGGATTGATTTGCTGCAAAGCTTTTTAAGTGGTCAAAATCTCGAGGCTGCATTTTTCCTTAGAGAATTACTTATTGCTTCTTCTGCTATTGTGAGCCTAAGCAGGCAAATTGGTTGTTCCCCCCTGCCAACCAACTTGATTCAAATTTTCGCTGGATGTTCTGAAGTCTTGTTAATGAAATTTTCAGGCATGCCTAAGCCAACGTCTGTTATTTGGTTAGATGGTACAGTTAAGTTTCTTGAAGCATTAGGGAGTCAGTTTCCATCAGCTAGTCCTGCCACAACAAGAGATGTGTACACAAAACTGTTAGAGTTGCACTTAAAGGCTATTGGAAGATGCATTTCTTTGCAAGGAAAAGGAGCTACCTTAGCTTCTCATGACATCGAGTCAAGTGCCAAGATATATAGTGAAGGAAAAGTTTCGGAATCAACTGTGTCAGATGCTCTCTATGGCTTAGACGAGCTCAAGGCTAGGCTGAGAATATCGTTCAAGGTTTTTATTGAGAAATCATCTGAAATACACCTATTATCTGCTCTACAAACTCTAGAAAGGGCACTAGTTGGTGCACGAGAAGGCTGTACAAAGAACTATGAGGTAGAAATGGATAGTGAATATGGGGGTAAAGTTTCTTCAATGGTTGCAGCTGGTATCGACTGCTTAGACTTGATACTTGACTTTGTCAAAGGACAGAAAAGATTGAGTATAGTTGGAGGGAACATGAGCAGCCTTTTCGCTTCATTGCTGAATATCATTGTACACCTGCGAGGTCCAACATTATTCTGCCGGAAACCAAACAGAGTGATTGTCAATAAGAACCCTGACTCCGGATCAGTAGTTGTCATGTGTATTGAGGTATTAACCAGAGTTGCCGCCAAGCATGCTATGTTTTGCCTGGACTCCTTTCACGTAGGGCATTCATTGTGCATACCAGCAACACTTTTCCAAGGTTTTTGCAATCTTAGAAAAGTAAAATCTCCTTATCCTAGTTTTTCGGGATCTGTGGCTAGCAACAAGCATGACCATCTTGAAGGTTGCACCCTAGTTGACAGGCAATGCTTGGTAACCCTGTATGCTGCATCTTGCCGGTTATTATGGACTGTTGTTAAGCATCGCAAGAGCGAGTGTGTGCGGTGCATTGCCCTCCTTCAAAATTCACTTCAAGTGCTGCTCCATTTTCTGGAAAATGGATGTTTTGATTCAGCTGACAGAAATGAAGAGGGAGTAAAATGTGCCAGTTATCTAAGGAGGGTTTATGAAGAGATTAGACAGCAGAAAGATGTTTTTGGTCGGCACTGCTTTATGTTCTTATCAGATTACATATGGCTTTACTCTGGACATGGTCCACTAAAAAGGGGAATCAAAAGGGAAGTTGATGATGCCCTAAGGCCAGGTGTCTATGCTTTAGTAGATGTTTGCTCACCTGATGACCTACAATATCTTCATACTGTATTTGGAGAGGGTCCTTGCAGAAGCACTTTAGCCAGCCTGCAGCATGACTATAAACTGCATTTCCAGTATGAAGGGAAAGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64718.p1 GENE.R_Transcript_64718~~R_Transcript_64718.p1 ORF type:complete len:1570 (+),score=255.61,Urb2|PF10441.5|84,Urb2|PF10441.5|6.4e-38 R_Transcript_64718:1640-6349(+)
MLERVYVRTEGDFGGSCLNFLKIIYHLLLSCYARFNQLWQAICRLDRSPQMEILNSLAKEFILVVQNFLEIEYEVIGDDLVSIWLMILSFSAMAHSSEDASLFSGTVNLGCRVFDLYSELRQVNHAVFTLCKGLRHLAFYQGDNEIKYSELLTPKGILHFAKFAKSGRSLLCSQKFRLAICNAIKSIPEGQASGCVQTLTDDISDSLAWMKVSCSVTDEREFGDAVSCRFTIQAELLGIVLSEIYSMVLDSLSVTPGNSYLMGVSIRNLIMVLHASMIHLVTPEQDVVDEFLLSVTGITIERNKVKCNNDLQDKIPLVMLYFFRLYMSCRSLCRQAVSLMPPDSSRKISGMMADYYTAYSGQDCMERADFEDEGYFSWIGRPSASLLSVVQYIRDNFLQQVSADYCSLIYVFHIMAFQRLVDLNRQIQSVQYIVQRNKNVIHDELMDDADLLILRDNKRKQERFLSYLKQEAIDLTDFIMEYLSLVDKKQLQLSRETTRSLSPQHTEIDSWDLGICTVNEKTLPTAVWWIICQNIDICSNYATKKKLKLFLSLLINNSLPYGRCGGVEKQTQNDLGEGIKVTKHQIAQEHLHDTTLYDQRFVCRHMAARICNSLKKCASLLLKGFPTVDAELNSADWEQVLSVTNNSSVAERDGLRTSYCTYSDLINRCSNTKSLSSTISLHIAACRRLLDLLCRMKEKLLSFKSFSRCVMYLVNFERLVINSFVYPHGKSCLHECHQLLGLLVSCRRALKYLLIAFIEENVESSNLSALPIFSGSSSPPLWLLKSVYLVVAWWSPLSSEHSGEVNDMIFSLMDHTSYMFFTLGKHQFSLALKSILSPKSIKNSSLLCGGDHSNESNSCVKLLNDVGTSKTVTATVEMLEDQIKSSLSSLSDAFNNGNAELRVQLADLNKLSSVVSCIQGFLWGSESALCDLNASGNDLKAKMRKCKHKTILGIKSFVEIFVEFLSVSSRIFLHNDQPLKISCDFEEQLNSDRNNGVQGTEASLENQEENSVPGKVGLASSDVQDDSDTGGKKESLQSDNPDSCIGGLTDLGSFNYNCLRIDLLQSFLSGQNLEAAFFLRELLIASSAIVSLSRQIGCSPLPTNLIQIFAGCSEVLLMKFSGMPKPTSVIWLDGTVKFLEALGSQFPSASPATTRDVYTKLLELHLKAIGRCISLQGKGATLASHDIESSAKIYSEGKVSESTVSDALYGLDELKARLRISFKVFIEKSSEIHLLSALQTLERALVGAREGCTKNYEVEMDSEYGGKVSSMVAAGIDCLDLILDFVKGQKRLSIVGGNMSSLFASLLNIIVHLRGPTLFCRKPNRVIVNKNPDSGSVVVMCIEVLTRVAAKHAMFCLDSFHVGHSLCIPATLFQGFCNLRKVKSPYPSFSGSVASNKHDHLEGCTLVDRQCLVTLYAASCRLLWTVVKHRKSECVRCIALLQNSLQVLLHFLENGCFDSADRNEEGVKCASYLRRVYEEIRQQKDVFGRHCFMFLSDYIWLYSGHGPLKRGIKREVDDALRPGVYALVDVCSPDDLQYLHTVFGEGPCRSTLASLQHDYKLHFQYEGKV*

Click here to download the sequence:
Link to NCBI Protein BLAST