Transcript Information: R_Transcript_64774.p1


Annotated TAIR IDAT5G06680.1
Annotated Gene Namespindle pole body component 98
Annotated Gene Symbol(s)SPC98, ATGCP3, ATSPC98, GCP3
Annotation TypeOrtholog
Chromosome Positionchr5:2056741-2059369 | Forward length=838
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2659418202766
Replicate 22.2659612389575
Replicate 33.3400179962243
Condition 2: 8 Hour
Replicate 13.0642471633177
Replicate 23.1320638170203
Replicate 35.5851109601191
Condition 3: 24 Hour
Replicate 16.3522750193762
Replicate 23.7982650213394
Replicate 36.4582549994634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_64774.p1 GENE.R_Transcript_64774~~R_Transcript_64774.p1 ORF type:complete len:871 (+),score=156.11,Spc97_Spc98|PF04130.9|1.6e-111 R_Transcript_64774:54-2615(+)
ATGGAGGATCACAAAGTCCTAGATCTAGTAAAAGAACTAGTCCATCGTTTACTTTCCCAATCCCAAAACCCTAACGATCAAAACCCTAATCACTCATTCGACCCCAATTCCTTCAATCAAGCCCTCCGTTATGCAATTCGCATACTTTCGAGTCGAATGACACCTTCAATTGCACCTGATGAAGCGTCAATGGCTGAATCCATCAAACGTCATCTCGTTACTCAAGGTAAATCATCTGAAGCCCTAACTTTTGCTGATCTTTATTCGAAATTCGCCGTGAAAACTGGTGTTGGTAGTGTTAATAATAAATGGGCTGTTCTTTATTTGTTGAGGGTCATTTCCGAGGACCGTAAAATTGGTGGTCTTATTCAACAGAGCAATATAGTTAATAATGGGGGTTTACCTTTCCTTGAGCCTAAATATGGGGAAAATGATTCTAGGGTTTTGAAGAGTGATGGTAATAAGGACCTGGGTTGGAAACAAGGTGGGGTTTTGATGATTTCGAAGGATCCCGAAAATGTTAGGGATATAGCGTTTAGGGAGTTTGGTAACTTGTTGAAGGAAGAAAATGAGGTTTCGGAGGAGGTTTTGGTTAGGGATGTGCTGTATGCTTGTCAAGGGATTGATGGGAGTTTTGTTAAATTCGACCCCAGTGTTGATGGGTATGTTTTCTTGGGCTCGGTTAAGGTGCCTAGGTCGACGAGGGTTATGGTCTCTAAGCTTTGTGAGTTGGGTTGGTTGTTTAGGAGGGTGAAAGGGTATATTTCAGAGAGCATGGATCGGTTTCCTGCTGAGGATGTCGGGACTGTAGGGCAAGCGTTTTGTGCAGCGTTGCAGGATGAGCTTACCATGTATTATAAGCTGTTGGCGGTGCTTGAAGCGCAGGCGATGAACCCTATACCGTTGATTTCTGAGGCTGCTAGTTCGGGGAATTATCTTTCATTGAGGAGGTTGTCAGTTTGGTTTGCTGAGCCTATGGTGAAGATGAGGCTCATGGCTGTTTTGGTTGATAGTTGTAAGGTTTTGAAGGGTGGGGCGATGGCGGGGGCAATTCATATGCATGCTCTACATGGGGATCCGCTCGTGCGTGACTTTATGAAACGCTTGCTTCGTAGGGTTTGTTCGCCCCTTTTTGAAATGGTTAGAAGCTGGGTCTTGGAAGGAGAGCTTGAGGATATATTTGCTGAGTTTTTTGTCGTGGGGCAGCCTGTCAAGGCCGAGTCTCTTTGGAGAGAGGGCTATCGTCTCCATGCTGGGATGCTTCCTTCTTTCATCTCACCGTCGCTTGCGCAGCGCATCTTGAGGACAGGGAAGTCTATTAACTTCCTTAGGGTTTGTTGTGAGGACCGAGGTTGGGCTGATGCCGCGACTGAAGCTGCTGCAGCTGCTGGAACTACAACTGGTAGAGGTGGCCTTGGGTATGGGGAAACCGATGCTCTTGAATTGCTTGTTGCTGAAGCTGCTAAGAGAATTGATAAGCATTTGTTGGATGTGATCTACAACCAATACAAGTTTAAAGAACATTGTTTGGCTATTAAGCGCTACTTGCTGCTTGGGCAGGGTGATTTTGTGCAGTATCTGATGGATATAGTTGGGCCAGAGCTCTCTGAGCCTGCTAATACTATTAGCACATTTAAGCTGGCTGGTTTGTTGGAAACTGCCATTAGGTCATCAAATGCACAGTATGATGATCGAGACATATTGGACAGGTTGAGGGTCAAGATGATGCCACATAATACTGGAGACCGGGGGTGGGACGTGTTTTCCCTGGACTATGATGCCAGAATCCCGTTAGACACTGTTTTTACAGAATCTGTTATGACCAGGTACCTAAAAATTTTCAATTTCTTGTGGAAGCTAAGGAGAGTTGAACACGCACTGATCAGTGCTTGGAAGACAATGAAGCCAAATTGTATCAGTTCTCATGCCCTTATCAAACTGCAAAATACAGTTAAGATGCAGTTGCTTTCAACAATAAGGAGGTGCCAAGTTCTTTGGGATGAGATGAATCATTTTGTCTCAAACTTGCAATATTATATAATGTTTGAAGTCTTAGAGGTGTCATGGTCCAACTTTTCTAATGAAATGGAAGCAGCAAAGGATCTTGATGACCTGCTTGCAGCCCATGAAAAGTATCTCCATTCCATAGTCGAGAAATCTCTTCTTGGAGAGAGATCGCGAAATCTATATGAGACATTATTTGTTTTGTTTGACCTAATATTGCGATTCCGTAGTCTTGCAGACAGGCTGTACGAAGGCATATATGAGCTGCAAGCGAGGTCTACAGACTCGTCCCGTGGCAAGAAAAACTTATCTAGGCAACTAAGCAAATCAGCAGAACCTAATTCATTGGTGTCTGAGGGCAGGAAGGCCTTAACCCAGCATGCTTCTAAATTTCTTGGTACTATGGGCCAAGAGCTAGATGATATCAGAAATAGATATTCAACCCTACTTACAGGATTCATTTCTCAGCTTCCTGTACAGCAACATATTGATTTGAAGTTCCTTCTTTTCCGGCTCGACTTCACTGAATTCTATAGTCAATCACGCCCCAACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_64774.p1 GENE.R_Transcript_64774~~R_Transcript_64774.p1 ORF type:complete len:871 (+),score=156.11,Spc97_Spc98|PF04130.9|1.6e-111 R_Transcript_64774:54-2615(+)
MEDHKVLDLVKELVHRLLSQSQNPNDQNPNHSFDPNSFNQALRYAIRILSSRMTPSIAPDEASMAESIKRHLVTQGKSSEALTFADLYSKFAVKTGVGSVNNKWAVLYLLRVISEDRKIGGLIQQSNIVNNGGLPFLEPKYGENDSRVLKSDGNKDLGWKQGGVLMISKDPENVRDIAFREFGNLLKEENEVSEEVLVRDVLYACQGIDGSFVKFDPSVDGYVFLGSVKVPRSTRVMVSKLCELGWLFRRVKGYISESMDRFPAEDVGTVGQAFCAALQDELTMYYKLLAVLEAQAMNPIPLISEAASSGNYLSLRRLSVWFAEPMVKMRLMAVLVDSCKVLKGGAMAGAIHMHALHGDPLVRDFMKRLLRRVCSPLFEMVRSWVLEGELEDIFAEFFVVGQPVKAESLWREGYRLHAGMLPSFISPSLAQRILRTGKSINFLRVCCEDRGWADAATEAAAAAGTTTGRGGLGYGETDALELLVAEAAKRIDKHLLDVIYNQYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISTFKLAGLLETAIRSSNAQYDDRDILDRLRVKMMPHNTGDRGWDVFSLDYDARIPLDTVFTESVMTRYLKIFNFLWKLRRVEHALISAWKTMKPNCISSHALIKLQNTVKMQLLSTIRRCQVLWDEMNHFVSNLQYYIMFEVLEVSWSNFSNEMEAAKDLDDLLAAHEKYLHSIVEKSLLGERSRNLYETLFVLFDLILRFRSLADRLYEGIYELQARSTDSSRGKKNLSRQLSKSAEPNSLVSEGRKALTQHASKFLGTMGQELDDIRNRYSTLLTGFISQLPVQQHIDLKFLLFRLDFTEFYSQSRPNI*

Click here to download the sequence:
Link to NCBI Protein BLAST