Transcript Information: R_Transcript_65174.p1


Annotated TAIR IDAT1G16630.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16270.1); Has 10587 Blast hits to 5736 proteins in 617 species: Archae - 88; Bacteria - 963; Metazoa - 3686; Fungi - 820; Plants - 541; Viruses - 438; Other Eukaryotes - 4051 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5682212-5684749 | Reverse length=845
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0801947272574
Replicate 22.6722564166198
Replicate 34.6454223097092
Condition 2: 8 Hour
Replicate 12.3972175472828
Replicate 21.3447803065328
Replicate 32.3863655920509
Condition 3: 24 Hour
Replicate 15.3621731566805
Replicate 24.2568191984611
Replicate 35.9387618311302


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65174.p1 GENE.R_Transcript_65174~~R_Transcript_65174.p1 ORF type:complete len:715 (+),score=211.12 R_Transcript_65174:122-2266(+)
ATGCAAGATGACTTCAAGAAGACTCTCCCCCCCTTACTGCCTAACCCTTCTTCATTAGGGAATGATGAGAATTTGAGTGAGAACAAACGAAATTCACGTCTAACAATAGGTATAAAATCTTTGAAACGCCAACAAAGAAAGCAATCATCATCACCCAAGAATTTAATGGCATCTTCAAAGTCTCTCAACCCAAAGAAGAAGATCTTAGAAGAATGGAAACAGGTTTCTTCTAAGAAACCCTCTTTTCTTGGTGCCAAATCAGTTTCTCACCAAGTGGGTGCTTCCAATTCTATCTCTGGAATATGTTTGCCTAAAATCCCATCAAGTAATTTTGATGATAATAATAATAATAATGATGGTGGTGATGATGATTCTTTTGTGCCTGATCCATCTATACCACCTTATGATCCTGTCACCAATTATCTCTCCCCTAGGCCAAAATACCTCCGGTACAATCCGAATAGGCGAAGAGAAATCAATCTTAGGAAAGAAAAATATGGGATTGATGACATTAGTCTTAGTCCAAGTGTTTCTGTTGAGTCTCAGACTCAGAGTTCTGCTGTTTATTATTCTACTGCAGAAAGTTGTTACAAGGAAAATGGGCGTAGTGAAGTAGAGGAATTAATGGGTGAGGATGAGGAGGAAGAAGAAGTGACTGAAGTGAGGAAATGGGTTTTGAAATGGGAAATATTAAAGGTTGTGATTGTGTTTGGTGTTTTGATTTTCTCTACCATTTACATATCTTCAGTTAACTCATCTGTTCCTTTATCTTCAGTAGCTAGAAGAAGGCTTGAAATTGAGTACCATAACCTTGGGAATATAACTTTTGGGGTTGGTTCTTTGAGAAGTGTTGCATTTGGGAATTGGGTCTTTGTTGAGAGTGGAGGATACGAGATGGGTATGTTTGAACTTGATGAAAGTGTTGTTCAACAGGAAGGGAAATCAAGGGAGAGTGATGCTTATGAGGAGGAGGATCAGGAGATTGAGATATCTGAAAATATTGATCATGGTCAAATAATAGTCAAGTTTGATACTGAGGATGATAATTTCCAGCCAGTTATGGAAAGTTTGAAGGATGAGGATGTGGAAAATGAGGTCTTAATAATCAATGCTCAAGCTCCTGATAAGGAAACTGAAGAGGAATATGTGGTTTTTGATTCAATGTCTAATGATGAGCTTGTAGAAGATAAAGTACAAATGGTAGGCTTAGAGCAAAATGAGGTGACAGAAGAGGAAATTCTGGCAAACTTTGATGAGAAAACTGATGATTCTGAAGAAGAAATTGTAGTTGAACAGGAGAATGTGAATGATCATGAAATGGGGTCAGTTGATATTCAGCCAAAGTCCAAGGAGTTTGAAAAGGAGTTAGTGATGGATGTTGCTGAAGACCAGAATGATGGTATAGTTATAGAAGAAGAAAATATGGTTGATTCTGAGAAGGAAATGATTGAATATGAACTGAAATCAAAGGATAGCAAGCTAGAAAATGTGGCAGATATTGTTACTGAATATCCCATTGTGGAAATCTTAGGGTACAATCAAGTTTGGCTGAACTTAAAGAATATGGTTTGGTTTGTGATCTCATCAGTGATGACTTTGGTTACATCCTTGTTAGTAAGGTTCTATTTTAAGTGCAAGAAGGCTTCTTCAAAGACAGTTCCCTCAAATGTGAAGCTGTGCTGTCAACCTGAGTTAGCAGAGAAAAACAGCCTAAAACTGCCACCTAAAGCAGGAGAGAAAATTGAGCAGGTTCTAAAACTTCAGTCTCATTCAAACCCTACACCAGTTATTGAGATGAATCCTAGATTCATACCTAGAGTGGAGGTGCTCAGTGAGTTTGCTATAGGAGGAGATCTCAGAAACTCAATTAAAAGCTGCACTTCTCAAGCTAATGTGCAAGAATGCAAGGAAAGTAAAGAAACTGTTCGTCATGAGAGGAGCAAGGCAAGCCATTCTGCTCGAGCTCCTAGTCGTTGGGAACCATCTGCTTCAGAGTTTTCAATGGCTGATTTTCTTTCATATGAAACCAACAAATGTGAGGAAAAGACAACTACTAAGGAGGATGGCAAAGAAATGACCAAGGTGACCCCTACTCCACTAAGGAGATCAAGCCGAATTCGGAACCGAGGGCTGACATCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65174.p1 GENE.R_Transcript_65174~~R_Transcript_65174.p1 ORF type:complete len:715 (+),score=211.12 R_Transcript_65174:122-2266(+)
MQDDFKKTLPPLLPNPSSLGNDENLSENKRNSRLTIGIKSLKRQQRKQSSSPKNLMASSKSLNPKKKILEEWKQVSSKKPSFLGAKSVSHQVGASNSISGICLPKIPSSNFDDNNNNNDGGDDDSFVPDPSIPPYDPVTNYLSPRPKYLRYNPNRRREINLRKEKYGIDDISLSPSVSVESQTQSSAVYYSTAESCYKENGRSEVEELMGEDEEEEEVTEVRKWVLKWEILKVVIVFGVLIFSTIYISSVNSSVPLSSVARRRLEIEYHNLGNITFGVGSLRSVAFGNWVFVESGGYEMGMFELDESVVQQEGKSRESDAYEEEDQEIEISENIDHGQIIVKFDTEDDNFQPVMESLKDEDVENEVLIINAQAPDKETEEEYVVFDSMSNDELVEDKVQMVGLEQNEVTEEEILANFDEKTDDSEEEIVVEQENVNDHEMGSVDIQPKSKEFEKELVMDVAEDQNDGIVIEEENMVDSEKEMIEYELKSKDSKLENVADIVTEYPIVEILGYNQVWLNLKNMVWFVISSVMTLVTSLLVRFYFKCKKASSKTVPSNVKLCCQPELAEKNSLKLPPKAGEKIEQVLKLQSHSNPTPVIEMNPRFIPRVEVLSEFAIGGDLRNSIKSCTSQANVQECKESKETVRHERSKASHSARAPSRWEPSASEFSMADFLSYETNKCEEKTTTKEDGKEMTKVTPTPLRRSSRIRNRGLTSP*

Click here to download the sequence:
Link to NCBI Protein BLAST