Transcript Information: R_Transcript_65228.p1


Annotated TAIR IDAT5G58900.1
Annotated Gene NameHomeodomain-like transcriptional regulator
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23783275-23784667 | Reverse length=288
E-Value5.6E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.991710433348
Replicate 221.467371258971
Replicate 321.364937950258
Condition 2: 8 Hour
Replicate 116.32390996483
Replicate 216.914000367051
Replicate 318.791571251234
Condition 3: 24 Hour
Replicate 119.42583688498
Replicate 220.570770311404
Replicate 317.60837780901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65228.p1 GENE.R_Transcript_65228~~R_Transcript_65228.p1 ORF type:complete len:312 (+),score=76.08,Myb_DNA-binding|PF00249.27|4.2e-06,Myb_DNA-binding|PF00249.27|7.3e-13,Myb_DNA-bind_6|PF13921.2|0.33,Myb_DNA-bind_6|PF13921.2|2.3e-05 R_Transcript_65228:947-1882(+)
ATGAAGTGGGAGATGGAAGTGCTATCATCATACCTGTCAAATGCAAGCTGGTTAATTGATGAGAGTAGGAGCACAAAATGGACTCAAGCTGAGAACAAGATGTTTGAAAATGCACTTGCTGTTTATGATAAAGATACCCCAGATCGGTGGCATAAAGTGGCAGCTATGATTCCAGGAAAGACAGTTGGTGATGTGATCAAACAATACAAGGAATTAGAAGATGATGTTAGTAATATTGAAGCTGGGTTAGTCCCGATTCCTGGCTATGATACCACCTCTGCTTTCACATTGGAATGGGTTAACCACAATGGTTATGATGGCTATAAGCACACTTACAGCCCTGGTGGCAAGCGCGGGCCTGGCGCTCGGCCCCCGGATCAGGAAAGGAAGAAGGGGGTTCCTTGGACTGAAGAGGAGCACAAGTTGTTCTTGATGGGTTTGAAGAAATATGGAAAAGGGGATTGGAGAAACATATCAAGGAATTTTGTGGTAACAAGAACACCAACCCAAGTGGCTAGCCATGCACAAAAATACTTCATAAGGCAACTATCAGGTGGAAAAGATAAGAGAAGAGCTAGCATTCATGATATAACAACTGTCAATCTAGAGAATGAAGCTCTTTCACCAGACAATAACAGCAGCAACAAGCAATCAACTTCTCCAGAGCACTCAACAATTACAGTGCAAACCCAACAACAGTCTGTGATGCCAAAAACACATTTTCAGTGGGATCAATCAAACAATGGAGGAGGAACAACAGGCATTGCTTTTGATTCAATGCAAGGAAATTTGTTCATGTCAACATATGGGGTTGGCTCTTATGGGTTTAAATTGCAGGGTCAGAATTTGCAGAGGAGCGATTTTTTAGATAACTACATTGGATCTCAAAACTTGGGTTTCCAGATTCAATCAACACAGCACCATCCTCATGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65228.p1 GENE.R_Transcript_65228~~R_Transcript_65228.p1 ORF type:complete len:312 (+),score=76.08,Myb_DNA-binding|PF00249.27|4.2e-06,Myb_DNA-binding|PF00249.27|7.3e-13,Myb_DNA-bind_6|PF13921.2|0.33,Myb_DNA-bind_6|PF13921.2|2.3e-05 R_Transcript_65228:947-1882(+)
MKWEMEVLSSYLSNASWLIDESRSTKWTQAENKMFENALAVYDKDTPDRWHKVAAMIPGKTVGDVIKQYKELEDDVSNIEAGLVPIPGYDTTSAFTLEWVNHNGYDGYKHTYSPGGKRGPGARPPDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLENEALSPDNNSSNKQSTSPEHSTITVQTQQQSVMPKTHFQWDQSNNGGGTTGIAFDSMQGNLFMSTYGVGSYGFKLQGQNLQRSDFLDNYIGSQNLGFQIQSTQHHPHG*

Click here to download the sequence:
Link to NCBI Protein BLAST