Transcript Information: R_Transcript_65233.p2


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73749337190783
Replicate 20.63625152776661
Replicate 30.69414356351977
Condition 2: 8 Hour
Replicate 10.24733196916409
Replicate 21.1293374667265
Replicate 30.18334960222613
Condition 3: 24 Hour
Replicate 10.46379408540816
Replicate 20.66834117850234
Replicate 30.22108792613028


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65233.p2 GENE.R_Transcript_65233~~R_Transcript_65233.p2 ORF type:internal len:99 (-),score=11.75,SEO_C|PF14577.2|6.9e-20 R_Transcript_65233:3-296(-)
GTAGCCACAAATGCTGGAGTAGCCCTAGAGCTAGTGTACATTGGGAAAAGCAATCCAAATGATGAGCAATCAAAGGAAATCATAAAGACCATTGAACCAACCTGTTGTTGGCAATTTTGGACAAGGCTTGAGTACATGTTATATTCGAGGATGCAACTTGCTAGTAAGAATAACAATATAGAGAATGACAATATATTGCAAGGACTCAAGAAAATCCTTAGCTTCAATGTGAGCTTGGGCGACGAATCGCAAGGATGGGCAATCTTCTCCTGTGGATTGAGTGAAATAGTTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65233.p2 GENE.R_Transcript_65233~~R_Transcript_65233.p2 ORF type:internal len:99 (-),score=11.75,SEO_C|PF14577.2|6.9e-20 R_Transcript_65233:3-296(-)
VATNAGVALELVYIGKSNPNDEQSKEIIKTIEPTCCWQFWTRLEYMLYSRMQLASKNNNIENDNILQGLKKILSFNVSLGDESQGWAIFSCGLSEIVT

Click here to download the sequence:
Link to NCBI Protein BLAST