Transcript Information: R_Transcript_65418.p1


Annotated TAIR IDAT5G44800.1
Annotated Gene Namechromatin remodeling 4
Annotated Gene Symbol(s)CHR4, PKR1
Annotation TypeOrtholog
Chromosome Positionchr5:18083659-18092162 | Reverse length=2223
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7326094941993
Replicate 23.1346320148137
Replicate 34.5041923721155
Condition 2: 8 Hour
Replicate 14.614086521693
Replicate 24.8345101841434
Replicate 36.4608827970608
Condition 3: 24 Hour
Replicate 16.1025759767771
Replicate 24.919015410279
Replicate 35.6786489174017


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65418.p1 GENE.R_Transcript_65418~~R_Transcript_65418.p1 ORF type:complete len:2197 (+),score=525.55,SNF2_N|PF00176.19|6.5e-64,Helicase_C|PF00271.27|1.4e-18,Helicase_C|PF00271.27|9.3e+02,Chromo|PF00385.20|1e+04,Chromo|PF00385.20|0.00013,Chromo|PF00385.20|1.4e-11,Chromo|PF00385.20|9.1e+03,ResIII|PF04851.11|4.2e-11,ResIII|PF04851.11|4.7e+03,HDA2-3|PF11496.4|4.9e-11,DUF1087|PF06465.9|5.4e-07,PHD|PF00628.25|3.8e-07 R_Transcript_65418:623-7213(+)
ATGATTTGTGATCTTGGTGGAAATTTGTTGTGCTGCGATAGCTGTCCGAAGACTTATCATCTTGAATGCCTTGATCCACCCCTTAAGCGTATTCCAAATGGCAAGTGGGAGTGTCCCACCTGCTGTAGTAGAAAGAATTTATCAGCTTCTATCGACCCCCAAGACTTAGTTAAACGAGCCAGAACGAAGACAGTGATTGAGAAGTCAAAAGCTGGAGGGAAGACGTCTAATAGTCTCAAAGTATCACAGCTCTTGGGAAGCTCCATTGGCAAGAAAAGATCATCCAGCAAAAGAAAATCTGGATTACCTGACAAAACTCATTCTTTAAAGAATATAGATGGCTCACGAATTGATTTGTTGGGCTGTAGCAAGTTTGGGCAATTGTCTGTTGATGGTTCTGTGGATGTTCTCTCTCCATCTGACATTGCTGATGATGAAAAGCAAAGTCAGACGACTACTACTCGAGAAATTGAAAAGATTTCAGGCTCTCCAGTAGCTGAGAAAAAGTTAAACTGTGTGTTGGAGGATGAGTTGCCGTCTTCAAGACATACTGAAATGGAGACAAGTGGAAGTGCTGAGCAAAAGTCCGAATACCCCGAAAGAATTCAATGTTCTGGGAAGGATGTTGCAGCTGAGTTAGGAGTACTTGCAGAAGCTCGTAAAAGAAAACATAAAACTGACAAAGATGGAAAGAAGAAAAAATCCAGGGTGTCTTTTGGGGAGTCTTCAATGACAAACTCTCACAAGGACAAAGGGAAACCACCTTTTCCATCTTTAAAGATTAATAAGCCACAAAGGAAACGTCGTTCTGTTCATCACAGAAGTTTTTCTTCACGTGCTGGGTCTGAAGGGGTAGATAGTCAGCAAGGCCATGAGGCAACTTCCGGGGAAACAGTGGGTACATCAAATGGGTTAGCAAAAGCAGACATTGTGCCTGATAAGATGATATTATCTGAAGACAATTCAATTGAAGAACTTCTACAGGTTGATCGGGTCTTGGGATGTAGAGTGAAAGCGGAAACAACACACTCTCCAGGTCAACAACCTGGGATAATGGCAACTGGGGCTCCTATGGATGATCATCAGAGTCTGGAAAATCTAATCAGAGAGTGTGAAGAGAAAGCTGGCTCTGAGCTGTTGCTGGATGATTCTGAACATCCTACTGTAGTTCAGAATGTTGAACGCAGTTCAGATGAGGGGCAATGTGTTCAGGATGATAGCGCAGTTGATAAAATGCAGTTATACAGAAAATCTGTGACCAAAGTGTGCAATCAAGGGAATATGCAGGGTGAGGTGGGCAAAGAGTTAGACTCTGCTGTTGTAATTGGTAAAGATTTAGGCAAATCTGAATTTCTAAGTGAGGATTTTCCATTGTCTCATATAAAGGAAAGTCAGAGTAAGGTGAATGAAGCAGTTGTAAATGATGCTAGTTGTAACAAAAATGTTCTGCAGCCTACCTTGACTGGATCTACATCATTTGAAGGAGAAAAGATCTCATATGAATTTTTAATTAAGTGGGTAGGGAAATCTCATATTCACAACAGTTGGATTCCTGAAGCGAAATTAAAAGCTTTGGCCAAAAGAAAGCTAGATAACTATAAGGCAAAATATGGAACTGCAGAAATAGATATCTGTGAGGAGCGATGGAAACAGCCCCAGCGGGTGATTGCAGTCCGATCATCGAAGGATGGTACAACTGAAGCTTTTATCAAATGGTCAGGTCTTCCATACGACGAATGCACTTGGGAAAGAACAGATGTGCCTGAAATTGAGAACTTCTTGCATTTGGTTGATCAGTTCAATCAGTTTGAACGTCAAACTCTGGAAAAGGATGCTGAGAAAGATACTTTAGTTAAGAAGGCGGATTCTCATCAAAATGAGATCGTTCCTCTTACTACGCAGCCTGAGGAGCTCAAAGGTGGTGCCCTATTTCCTCATCAACTGGAAGCTCTCAATTGGCTGCGCAAATGCTGGTATAGATCTAAAAATGTTATTCTTGCTGATGAGATGGGCCTTGGAAAAACTGTATCTGCATGCGCCTTCATTTCGTCCCTATACTTTGAGTTTAAAGTGAAGCTTCCTTGTCTTGTCTTGGTGCCTCTTTCAACAATGCCAAATTGGATGGCTGAGTTTGCCTTATGGGCTCCAGACTTGAATGTAGTTGAGTATCATGGGAATGTCAAAGGAAGAACTCTAATTCGTCAATTTGAATGGCACGCTAGCCTTCCAAATGAATTGAATAAGAAAAGTGCAGCTTACAAATTTAATGTTCTGCTAACCACCTATGAGATGGTCCTTGCTGATGCTTCTCAGTTGCGTGGAATTCCTTGGGAAGTTCTCATTGTTGATGAAGGACATCGGCTTAAGAACTCCAGTAGTAAGCTTTTTAGCTTGCTTAATTCCTTTTCTTTCCAGCATCGTGTACTGTTGACTGGGACACCTCTTCAAAACAACATTGGCGAGTTGTACAACTTGCTCAACTTTTTGCAGCCAACTTCATTTCCTTCTTTATCATCTTTTGAGGAAAATTTTGAGGACCTCTCAACTGCTGAAAAGGTGGAGGAACTGAAGAAACTTGTTGCTCCACATATGCTAAGAAGGCTGAAGAAAGATGCCATGCAAAATATCCCACCAAAGACTGAACGAATGGTTCCTGTTGAGCTGTCCTCTATCCAGGCTGAATATTACCGTGCAATGCTAACAAAGAACTATCAGATCTTGAGGAATATAGGGAAAGGGGTTCCACAACAGTCAATGCTTAACATTGTTATGCAACTAAGAAAGGTTTGCAACCATCCATATCTAATCCCTGGTACAGAACCTGATTCTGGATCAGTTGAATTCCTGCAAGAGATGCGGATAAAGGCTTCAGCCAAGCTTACTCTGTTGCACTCAATGCTCAAGTTGCTACATAAAGATGGTCACAGAGTCCTGATATTTTCTCAGATGACAAAGCTTCTAGATATTTTGGAAGACTATCTGACTATAGAATTTGGTTCAAAATCATTTGAGAGAGTTGATGGATCTGTTTCAGTTGGTGATCGTCAAGCAGCAATTGCACGCTTCAATCAAGATAGAAGTCGGTTCGTTTTCTTGTTGTCAACACGATCTTGTGGCCTTGGAATCAATTTGGCGACTGCTGACACTGTCATAATTTATGACTCGGATTTCAATCCACATGCTGATATCCAAGCTATGAACCGTGCCCATCGAATCGGACAATCCAACAGACTTTTGGTTTATAGGCTTGTGGTTCGTGCTAGTGTTGAAGAACGTATTTTGCAGCTAGCCAAGAAAAAGCTAATGCTAGACCAGCTTTTCGTAAACAAGTCTGAATCTCAGAAGGAAGTGGAAGACATTCTTCGTTGGGGAACTGAAGAACTTTTCAGTAGTTCTAGTAAGGACAGAGGTGAGAATGATTTGAGCAAGGACGAAGTACTTGCAGATACTGAGCATAAGAGCAAGAGAAGACTTGGTGGCCTTGGAGATGTTTACCAAGATAAATGCACAGAGGGAAGCTGCAAAATCATTTGGGATGAGAATGCCATCTTAAAACTTCTCGACCGTTCGAACCTTCAATCTGGATCACCGGATAATTCTGAAGGTGATGGAGAACATGATATGCTTGGATCAGTTAAGGCTCTGGAATGGACTGATGAACCATTGGATGAGGAAGGAAAAGCAGGTTCACCTGTTGTTCTCACAGATGATGCTTCCGGACCACATTCAGAAAAAAGGGAAGAATTAGGCGGTGCTGAGGAGAACGAGTGGGATCGACTTCTACGTGTCAGGTGGGAGAAATATCAGAATGAAGAGGAAGCTTCTCTTGGTAGAGGAAAACGCCTTAGGAAAGCTGTTTCTTACAGGGAGGCATTTGCACCTCATCCGAATGAAACTCTGAGTGAGAGGGCTGGTGAAGACGACCGTGAACCCGAACCAGAGCCTGTAAAGGAGTACACTCCAGCAGGACTTGCGTTGAAGGAGAAATTTGCTAGGTTGCGTGCTCGGCAAAAAGAAAGACTTGCTTGGAGGAAAGCTCTTGAAGAATCCTTATTAGCTGGCAGTTTTCCTAGACCTGAACTGCTTTCCCAGTGCCCTTCTGATATGGAAGGGAAAGAGGAGACTACAAGAACAGTGCAACTACCTAGAGAAAAGGTCAACTCAATTGAGGTCGGGGATGACATGATGGGTGAAATGGAAGCTCCTAATAAATCTAGTGGCACAATTCAAAGAGTTGGTCGACTATCAAAGCATAAGTTGAGCCATCAGCTTAACTCATCCGTAAAAGTTCCAAGCCATTCTTCTGAAAAAGCTATTTTGGCTCAGAAGGATGTTGCAAATTTAGCTACTTCAGCCGCTTCGAACTATTTGTTGCCTGTTCTTGGACTTTGTGCTCCAAATGCTCCAAATAATTGTTTACCAGAGTCATCTCACAGAAACTTCTCTAGATCATATGGAAGAGAAGGTCGACATGAAAACCAGTCAGATTTTCTTGCACAGACATCTGCTTGCCCTAGTACTTCTACTGACAAGGAAGTGAAGGGTTTTGAGGTAGCTACTGGCAAATTGAGACTCCCTGAAGTGTCTCTGGGTTTTCCCCTGGAGCATTTCAAAAGCAGCTTTCAGGACAACTCACTCCCTTTTCTGATGTACCCTCCACCGTTCTTGCGACGGAAGTTCCCAGATGGTATAGAGAGCACAGGTGCTAGTTCTGCTGATTTTCTGGAAAAGATGGGATTGCCAAAGTTGCCTTTCGATGAAAAGTTGCTTCACGCTTTTCCCTTTTCAAGCAGACTGCAAGGCACAACACCCGACTTAGCCAACTTATCGCTGGGGAAGAGAAATGAAATTGCAAATGGACAAGTCCCTTCCACAATGCCTTTCTTGCCTAATTTCAAATTCCCTCTGCAAGATTTACCTCACTGTAATCAGGAAGAGATAGACCCACTACCAACACTAAGTTTGGGACGCAAGCCAAACACATGTCGATCATTTCCTGAAAGTCACAGGAAGGTTCTTGAGAATATAGCTATGAGGACAGGATCTGGATCAAGCAATTTACTTAAGAGAAAGTCGAAGCCAGATGGTTGGTCAGAAGATGAACTTGACTCTCTTTGGATTGGTGTCCGGAGACATGGACACAGCAACTGGGATGCCATGCTTAGGGACCCCAGGCTAAAGTTTTCAAAGTACAAAACTCCAAGTGAACTGGCTTCAAGATGGGAAGAGGAACAGCTGAAGATATATGATAATTCTCTAGCCATGAGACCAAGTAAGCCAAAATCTCAGAAGTCTGCCCTTTTCCCAAGCATTTCTGATGGAATGATGTCCCGGGCCTTTCATGGAAGTAGGCTGGGTGGACCTGTCAACTTTCAGTCACACTTAACAGACATCAAATTGGGATTTGGTGATCTTGCAGCCAACTTTCGCCCTTTTGAAGCTTCTAGTTTTGCTGGTCTTCATAATGAACATTATGCTCCATTATCAGCCTTGGCTCCTGGTAATTTTCAAGCAAGGTTCGGGGGAGATCTTCCTTCAATTGTCCCTGATATTCAGGATACTTTGTCAAATATACCGATGGAGCCACCAGTGCGTCATAATGCATTTGGAGCCAGTAATTCAAGAGCTTTGGGCTTAAACTACTCAAGTGGCTGTGATTTTGGGCAGGAAGATGAATTAGATGCGAGTAGATATCAAAAGCCCCCTTGTCAGCTAGATAGCTCATTGAATATTCCTTGTGGTTCCCAGATTGATGTGGGTACTAACGAGCTGCCAGCTTCTGGTTTATTGCCTAATCTGAATAATGCACCGAATCCTTCAAGCGTGAAAGGTAAGGAAGTAGTGGTAGAAAGCAGTTCTTCGAAGGATAAGCTGCCACATTGGCTTCGGAAAGCTGTAGGTGCTACTTCTAAGACTCCTGATCCTGAACTTCCACCTGGAGTATCGGCCATAGCTGAGTCAGTTCGTTTGTTGTATGCTGAAGAAAAACCTGCAATCCCACCATTTGTTACTCCTGGACCTCCTCCTCCTCAACCAAGAGATCCTAGAAAGACCTTGAAGAAAAGAAAGAAAAGAAGACATCATTTGCTCATGACAATGCCAACTGATGTCACTGGAAGCAGCCAAGACTTTCATGGTAGCTCCTCTAGTGATAGCCTCCGTTCAAGGTCAATTCCAAGTGCTCCATCAATGTCAATATTCCAATTGCAGCCCCCAAGTTTGGGGCTGATGAACCCATCATCGTCATTCTTAGAGCCCACCAGGAAATCGAGCATTGGATTATCGCCCTCTCCGGAGGTGCTTCACTTGGTGGCTTCCTGTGTAACTCCTGGTTTATGTGGGCCTGCAAACTCCATCTTGACCTCCCCAGCTTTCCCTGACAATAAACAAGCCCCCATGCAAGAACCAGATCAAAAAGTAAATAAGGATGTGAAGGTGAACTCCCCGCATGACCTCAGGGCGGACGAATCTCATGGTGGGGATTCTAGCAAGACTCAGTCTGAGTCACCCCAAACCAACCAGCCAGATGCAGAGGAAATATCATCAGATAAAACTGTTTCAGATAATCAGAATGGTGATAATGAGCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65418.p1 GENE.R_Transcript_65418~~R_Transcript_65418.p1 ORF type:complete len:2197 (+),score=525.55,SNF2_N|PF00176.19|6.5e-64,Helicase_C|PF00271.27|1.4e-18,Helicase_C|PF00271.27|9.3e+02,Chromo|PF00385.20|1e+04,Chromo|PF00385.20|0.00013,Chromo|PF00385.20|1.4e-11,Chromo|PF00385.20|9.1e+03,ResIII|PF04851.11|4.2e-11,ResIII|PF04851.11|4.7e+03,HDA2-3|PF11496.4|4.9e-11,DUF1087|PF06465.9|5.4e-07,PHD|PF00628.25|3.8e-07 R_Transcript_65418:623-7213(+)
MICDLGGNLLCCDSCPKTYHLECLDPPLKRIPNGKWECPTCCSRKNLSASIDPQDLVKRARTKTVIEKSKAGGKTSNSLKVSQLLGSSIGKKRSSSKRKSGLPDKTHSLKNIDGSRIDLLGCSKFGQLSVDGSVDVLSPSDIADDEKQSQTTTTREIEKISGSPVAEKKLNCVLEDELPSSRHTEMETSGSAEQKSEYPERIQCSGKDVAAELGVLAEARKRKHKTDKDGKKKKSRVSFGESSMTNSHKDKGKPPFPSLKINKPQRKRRSVHHRSFSSRAGSEGVDSQQGHEATSGETVGTSNGLAKADIVPDKMILSEDNSIEELLQVDRVLGCRVKAETTHSPGQQPGIMATGAPMDDHQSLENLIRECEEKAGSELLLDDSEHPTVVQNVERSSDEGQCVQDDSAVDKMQLYRKSVTKVCNQGNMQGEVGKELDSAVVIGKDLGKSEFLSEDFPLSHIKESQSKVNEAVVNDASCNKNVLQPTLTGSTSFEGEKISYEFLIKWVGKSHIHNSWIPEAKLKALAKRKLDNYKAKYGTAEIDICEERWKQPQRVIAVRSSKDGTTEAFIKWSGLPYDECTWERTDVPEIENFLHLVDQFNQFERQTLEKDAEKDTLVKKADSHQNEIVPLTTQPEELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFISSLYFEFKVKLPCLVLVPLSTMPNWMAEFALWAPDLNVVEYHGNVKGRTLIRQFEWHASLPNELNKKSAAYKFNVLLTTYEMVLADASQLRGIPWEVLIVDEGHRLKNSSSKLFSLLNSFSFQHRVLLTGTPLQNNIGELYNLLNFLQPTSFPSLSSFEENFEDLSTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVPQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLQEMRIKASAKLTLLHSMLKLLHKDGHRVLIFSQMTKLLDILEDYLTIEFGSKSFERVDGSVSVGDRQAAIARFNQDRSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQKEVEDILRWGTEELFSSSSKDRGENDLSKDEVLADTEHKSKRRLGGLGDVYQDKCTEGSCKIIWDENAILKLLDRSNLQSGSPDNSEGDGEHDMLGSVKALEWTDEPLDEEGKAGSPVVLTDDASGPHSEKREELGGAEENEWDRLLRVRWEKYQNEEEASLGRGKRLRKAVSYREAFAPHPNETLSERAGEDDREPEPEPVKEYTPAGLALKEKFARLRARQKERLAWRKALEESLLAGSFPRPELLSQCPSDMEGKEETTRTVQLPREKVNSIEVGDDMMGEMEAPNKSSGTIQRVGRLSKHKLSHQLNSSVKVPSHSSEKAILAQKDVANLATSAASNYLLPVLGLCAPNAPNNCLPESSHRNFSRSYGREGRHENQSDFLAQTSACPSTSTDKEVKGFEVATGKLRLPEVSLGFPLEHFKSSFQDNSLPFLMYPPPFLRRKFPDGIESTGASSADFLEKMGLPKLPFDEKLLHAFPFSSRLQGTTPDLANLSLGKRNEIANGQVPSTMPFLPNFKFPLQDLPHCNQEEIDPLPTLSLGRKPNTCRSFPESHRKVLENIAMRTGSGSSNLLKRKSKPDGWSEDELDSLWIGVRRHGHSNWDAMLRDPRLKFSKYKTPSELASRWEEEQLKIYDNSLAMRPSKPKSQKSALFPSISDGMMSRAFHGSRLGGPVNFQSHLTDIKLGFGDLAANFRPFEASSFAGLHNEHYAPLSALAPGNFQARFGGDLPSIVPDIQDTLSNIPMEPPVRHNAFGASNSRALGLNYSSGCDFGQEDELDASRYQKPPCQLDSSLNIPCGSQIDVGTNELPASGLLPNLNNAPNPSSVKGKEVVVESSSSKDKLPHWLRKAVGATSKTPDPELPPGVSAIAESVRLLYAEEKPAIPPFVTPGPPPPQPRDPRKTLKKRKKRRHHLLMTMPTDVTGSSQDFHGSSSSDSLRSRSIPSAPSMSIFQLQPPSLGLMNPSSSFLEPTRKSSIGLSPSPEVLHLVASCVTPGLCGPANSILTSPAFPDNKQAPMQEPDQKVNKDVKVNSPHDLRADESHGGDSSKTQSESPQTNQPDAEEISSDKTVSDNQNGDNEP*

Click here to download the sequence:
Link to NCBI Protein BLAST