Transcript Information: R_Transcript_65681.p1


Annotated TAIR IDAT1G03190.1
Annotated Gene NameRAD3-like DNA-binding helicase protein
Annotated Gene Symbol(s)ATXPD, UVH6
Annotation TypeOrtholog
Chromosome Positionchr1:775822-779863 | Forward length=758
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.343068628604
Replicate 210.788612862129
Replicate 315.331518707306
Condition 2: 8 Hour
Replicate 110.742810312823
Replicate 213.87612035204
Replicate 316.238397379766
Condition 3: 24 Hour
Replicate 116.87807171681
Replicate 214.122339684876
Replicate 318.571385794943


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65681.p1 GENE.R_Transcript_65681~~R_Transcript_65681.p1 ORF type:complete len:759 (+),score=117.71,DEAD_2|PF06733.11|6.6e-53,Helicase_C_2|PF13307.2|4.2e+03,Helicase_C_2|PF13307.2|4.4e-45,HBB|PF06777.7|1.1e-28,HBB|PF06777.7|0.23,ResIII|PF04851.11|0.00082,ResIII|PF04851.11|3.9 R_Transcript_65681:240-2516(+)
ATGAAGTTCCAAATAGAAGATGTGACAGTCTATTTTCCTTATGACCACATATACCCAGAACAGTATGCCTACATGGTGGAGCTCAAACGAGCTCTTGATGCAAAGGGCCACTGCCTGCTGGAAATGCCCACTGGCACTGGGAAAACCATTGCACTTCTCTCCCTTATTACAAGTTATTCTCTTTGCAAACCCTCAAATCCAGTCAGGCTCATTTACTGCACTCGTACTGTCCACGAGATGGAAAAGACTTTAGCGGAGCTGAAAGTCCTTCATGAATATCAGGTTCGACACTTGGGCCCTGCTGCTCGTATGCTTGCCATTGGTCTCTCCTCCCGTAAGAACCTTTGTGTCAACCCATCTGTTGTCTCTGCTGAAAACAGAGACTCTGTTGATGCTGGCTGTCGTAAGCTCACTGCAAGCTGGGTTAGAGAGCTGGCAATGAAAAACTCTAATATCCCTACTTGTCAATGGTTTGAGAATTATGAGAAGTCTGGTTCAGAGGCAATGTTGCCCCCAGGGGTTTACACTTTGCAGGATCTAAGAGCATTTGGCAAGGAGAGAGGATGGTGCCCATATTTCTTGGCACGACATATGGTGCAATTCGCAAATGTTGTGGTTTACAGCTACCAGTATCTGCTTGATCCAAAAGTCGCCGGGATCATATCTAAGGAATTACAGAAGGAGTCTGTGGTTATTTTCGATGAGGCTCATAACATCGATAATGTATGCATTGAGGCACTCAGTGTTAGTGTGAGAAGACAAACACTTGAAGGTGCAGCCAGAAATATCACTAGAATGTCACAAGAGATTGATAGGTTTAAGGCCACTGATGAGCGGAGACTTCGTGAAGAATACAACCGCCTTGTTGAAGGGCTGGCACTAAGGGGAGACCTACCAATTGGTGATACATGGCTCTCCAACCCAGCTCTGCCTAATGATATTCTGAAGGAGGCAGTACCAGGAAATATTCGCCGAGCAGAGCATTTTCTCTCTGTCCTGCGCAGACTCGTACAATATCTCAGAGGCCGTCTGGAAACTGAAAACTTTGAAAAAGAGTCACCTGTTTCGTTTGTGGCATCTTTAAATTCTCAAGCTGGACTTGACCAGAAAACGTTGAAATTTTGTTATGATCGTTTGCACTCCCTCATGTTGACCTTGGAAGTAACCGATACAGATGAGTTCTTAAGCATCCAAACAATTTGTGACTTTGCAACGCTGGTGGGCACATATGCTAGGGGGTTTTCAATTATTATTGAACCTTTTGATGAGAGAATGCCTCATATCCCCGATCCTGTATTGCAGCTAAGCTGTCATGATGCTTCACTTGCTATAAGGCCTGTATTTGAACGTTTCCAGTCAGTTGTAATTACCTCAGGAACTTTAAGCCCTATTGATCTGTATCCACGCCTTCTTAATTTCAATCCAGTAGTCAGTCGAAGTTTTACCATGTCCTTGACAAGAGAATGCATATGTCCCATGGTCCTAACTCGTGGAAGCGACCAACTTCCAGTCAGCACGAAATATGATATGAGAAGCGATCCTGGTGTTGCAAGGAACTATGGCAGGCTATTGCTAGAAATGGTTTCTGTTGTTCCGGATGGCATAGTGTGCTTTTTTGTTAGCTATTCTTACATGGATGCAATTGTGAATACCTGGAATGAAACTGGAATTCTAAAGGATATAATGCAACATAAGCTTGTATTCATCGAAACCCAAGATGTGGTAGAGACTACATTGGCTTTGGACAACTACCGTAGGGTTTGTGATTGTGGGAGAGGTGCTGTCTTTTTCTCTGTTGCAAGGGGAAAGGTTGCTGAAGGTATAGATTTTGATCGACATTATGGCAGATTAGTGATCATGTTTGGGGTTCCGTTCCAATACACACTGAGCAAGATATTACTTGCCCGATTGGAATATTTACGGGACACATTTCAGATTAAAGAAGGCGATTTTTTAACGTTTGATGCGCTGAGACAAGCTGCACAATGTGTGGGCAGAGTTATCCGTTCAAAAGCAGATTATGGGATGATGATATTTGCTGACAAAAGATATAGTCGGCATGATAAGCGCTCAAAGCTGCCTGGGTGGATATTGTCTCACCTTCGAGATGCACACCTTAATTTGAGTACTGATATGGCTCTGCACATAGCAAGAGAGTTCCTGCGGAAGATGGCCCAACCATATGATAAGACCGGCCACAGTGGTCAGAAAACCTTGTTGTCTCAGGAAGACATAGCAAAGATGAACAGCGGCGATGCGGATGAGATGCAGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65681.p1 GENE.R_Transcript_65681~~R_Transcript_65681.p1 ORF type:complete len:759 (+),score=117.71,DEAD_2|PF06733.11|6.6e-53,Helicase_C_2|PF13307.2|4.2e+03,Helicase_C_2|PF13307.2|4.4e-45,HBB|PF06777.7|1.1e-28,HBB|PF06777.7|0.23,ResIII|PF04851.11|0.00082,ResIII|PF04851.11|3.9 R_Transcript_65681:240-2516(+)
MKFQIEDVTVYFPYDHIYPEQYAYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYSLCKPSNPVRLIYCTRTVHEMEKTLAELKVLHEYQVRHLGPAARMLAIGLSSRKNLCVNPSVVSAENRDSVDAGCRKLTASWVRELAMKNSNIPTCQWFENYEKSGSEAMLPPGVYTLQDLRAFGKERGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKELQKESVVIFDEAHNIDNVCIEALSVSVRRQTLEGAARNITRMSQEIDRFKATDERRLREEYNRLVEGLALRGDLPIGDTWLSNPALPNDILKEAVPGNIRRAEHFLSVLRRLVQYLRGRLETENFEKESPVSFVASLNSQAGLDQKTLKFCYDRLHSLMLTLEVTDTDEFLSIQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIRPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRECICPMVLTRGSDQLPVSTKYDMRSDPGVARNYGRLLLEMVSVVPDGIVCFFVSYSYMDAIVNTWNETGILKDIMQHKLVFIETQDVVETTLALDNYRRVCDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGHSGQKTLLSQEDIAKMNSGDADEMQY*

Click here to download the sequence:
Link to NCBI Protein BLAST