Transcript Information: R_Transcript_65692.p1


Annotated TAIR IDAT4G37930.1
Annotated Gene Nameserine transhydroxymethyltransferase 1
Annotated Gene Symbol(s)SHM1, STM, SHMT1
Annotation TypeOrtholog
Chromosome Positionchr4:17831891-17834742 | Reverse length=517
E-Value2.4E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1264804773594
Replicate 26.5321823517372
Replicate 37.8900985053414
Condition 2: 8 Hour
Replicate 15.1692381555295
Replicate 23.4783593975178
Replicate 32.8235838742824
Condition 3: 24 Hour
Replicate 15.6119084334388
Replicate 25.6363439387031
Replicate 32.431967187433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65692.p1 GENE.R_Transcript_65692~~R_Transcript_65692.p1 ORF type:3prime_partial len:90 (-),score=24.16,SHMT|PF00464.15|2.2e-07 R_Transcript_65692:1-267(-)
ATGGTTCCTGGTGGCATCAGGATGGGAACCCCAGCCCTTACATCTAGGGGTTTTGTCGAAGAAGACTTTGTTAAAGTGGCTGAGTACTTTGATGCTACTGTGAAGCTGGCTCTAAAAATCAAGGCTGCATCTACAGGAACAAAATTGAAGGACTTCGTTAGTACCATGAATTCTGGTGCTTTTCAGTCAGAGATTGCAAATCTCCGCCATGATGTTGAAGAGTACGCTAAACAATTCCCAACAATTGGATTTGAAAAGGAGACTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65692.p1 GENE.R_Transcript_65692~~R_Transcript_65692.p1 ORF type:3prime_partial len:90 (-),score=24.16,SHMT|PF00464.15|2.2e-07 R_Transcript_65692:1-267(-)
MVPGGIRMGTPALTSRGFVEEDFVKVAEYFDATVKLALKIKAASTGTKLKDFVSTMNSGAFQSEIANLRHDVEEYAKQFPTIGFEKETM

Click here to download the sequence:
Link to NCBI Protein BLAST