Transcript Information: R_Transcript_65693.p1


Annotated TAIR IDAT2G13370.1
Annotated Gene Namechromatin remodeling 5
Annotated Gene Symbol(s)CHR5
Annotation TypeOrtholog
Chromosome Positionchr2:5544601-5555543 | Reverse length=1724
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.170833966833
Replicate 28.2064289409387
Replicate 312.799653607578
Condition 2: 8 Hour
Replicate 112.278378137993
Replicate 213.68584372098
Replicate 319.013470534036
Condition 3: 24 Hour
Replicate 116.311076704339
Replicate 210.957389767293
Replicate 315.576137267051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65693.p1 GENE.R_Transcript_65693~~R_Transcript_65693.p1 ORF type:complete len:1727 (+),score=460.78,SNF2_N|PF00176.19|8.7e-67,Chromo|PF00385.20|2.6e-05,Chromo|PF00385.20|3.7e-17,Chromo|PF00385.20|1.3e+04,Chromo|PF00385.20|2.7e+03,Helicase_C|PF00271.27|3.5e-22,DUF4208|PF13907.2|1.5e+04,DUF4208|PF13907.2|1.8e-17,HDA2-3|PF11496.4|9.6e-11,ResIII|PF04851.11|4.5e-08 R_Transcript_65693:584-5764(+)
ATGGCATTTTTTAGGGATTATTCGAGTGAAACAGTCACTCATAGAGCTATGGATGATAAGAATGGTAGTAATAATGCAGTCAATAGAGTACACAGCCCGATAGAAATAGACTTGAATTCTAGTGAAAATGATTTCGAAATGAAGATGAATGGGCACTATCAAAGTGATGGTGAACCAGATATTAACAGGTTGCCAAATGATGTGGCTGTCAATGTTGGTGCTGAGATGGGGCTTTCGACTTCCCAGGTGACGTATGAGAGACGAGGTGGAGGTTCGGCTGGGAAGTGGGGGTCCAGTTTCTGGAAAGGCTGTCAACCTATGGGTCCTCGAGAAGTTTCTGATTCTGGACATGAATCTAGAAGCGGTTCAGAGTATAGAAATGATGAAGGGTCTGATGGTAATTCGTCAGGGGGTGGGGATAGGTTAGAATTAGATGATTATGATGGACAGAAGGAAGCAGAAAAGCTTCCGGCAGATGAAATGTTGTCTGATGAGTATTATGAGCAAGATGGGGATGATCAGAATGATATGTTGCACTATAGAGGTTTGAACTCGGCCTCTTTGGATCCAAGTCGGCAGTCAAGGACAGTCATGGCAACCAGTGCCGGTCCTCGGAATCGAAGGAGACCCTATGATGACGAAGATTATGAGGATGATGATGAAGAGGAGGATGAAGTAGATGAAGATGATCCTGATGATGTGGATTTTGATCCTGATGCTGGTGCTGCTGATGCTCATCCAAGGGATAAGGATGGTGATTGGGAAGCTGAAGACTCGGATGAAGACGTTGAAAGTGAAGGAGACATTGAAATTTCAGAAGATGATGACGACGACGACGCATACTATAAGAAGAGGCCTAGGGGTGGCCAAAGAGGTAAAAGTGGACGAAATGTAAAGGCTGGCAAGGTACAGAGATCACAGGCTGCTCCTACTAGAAGAAGGAAAGGCAGGGTGTTAGATGATGACTTCTCTGCTGAGGATTCGGAGGATGAAAGTGATGAGGATTTCAGGAAAAAGAGAGGCGCACATGTTCACAAAACCAGTAATGTGGGTCGGAAAAATGAGACTCGCACATCAGGCAGGGCAGTTCGCAAGGTTTCATATGTTGAAAGTGACGAGAGTGAAGAAGTTGATGAATGCAAAAATAAGAAAAAGGAGGAGATTGAAGAAGAGGATGGTGACACAATTGAAAGGGTTTTGTGGCATCAGCCCAAAGGGATGGCTGAAGAGGCTATTAGGGCCAACAAATCGACTGACCCAGTGTTATTAAGCCACCTCTTTGACAGTGAACCGAATTGGAATGAGATAGAATTTCTGATAAAATGGAAAGGCCAATCACACCTGCATTGTCAATGGAAATCATTAGCCGAGTTACAAAATCTCAGTGGTTTCAAGAAGCTCCTGAATTACATGAAAAAGGTTGCGGAAGATGTAAGGTTTCGGAAGTCAGTATCCCGTGAGGAGATTGAAGTCCATGATGTGAGCAAGGAAATGGACTTGGATCTTTTCAAACAAAATTGTCAGGTAGAGAGGATAATTGCTGATAGGATCAGCAAGGATGGCTCAGGTGGCGTTTCTCCTGAGTATCTAGTGAAGTGGCAAGGATTATCATATGCTGAAGCTACTTGGGAGAAAGATGTGGATATTGCATTTGCTCAGGATCTTATTGACGAGTACAAGGCTCGCGAGGCCACTATGGCAATACAGGGGAAAACAGTGGATGCTCAGCGGAAGAAGATCAGAGGAAGTTTGCGGAAACTGGATGAGCAGCCTGAATGGCTGAAAGGAGGCAAACTTCGTGATTATCAGCTTGAGGGTTTGAATTTTCTTGTCAACAGCTGGAGAAATGACACCAATGTTATCTTAGCTGATGAGATGGGTCTTGGTAAAACTGTTCAATCAGTTTCAGTGCTTGGTTTTTTGCAGAACGCTCAACAAATCTATGGACCATTTCTTGTGGTGGTACCATTATCTACTTTGTCCAATTGGGCAAAAGAATTTCGGAAATGGCTTCCTACTATGAACGTGATCGTGTATGTTGGCACCCGAGCAAGCAGAGAGGTCTGCCAGCAATTTGAGTTTTCCAATACCAAGAACACTGGTAGAATGATAAAATTTGACGCATTGTTGACGACATATGAAGTTATTCTGAAGGATAAGGCTGTGCTGTCAAAGATCAAATGGAACTACCTTATGGTTGATGAAGCACACCGATTGAAGAATTGTGAAGCATCATTATACACTACTCTCTCAGAATTTAGTACCAAGAACAAGTTGCTTATCACTGGTACTCCGTTGCAGAATAGTGTTGATGAGCTATGGGCCCTGCTTCACTTCTTGGATCCTGATAAGTTTAGAAACAAGGATGATTTTGTCCAAAATTATAAGAATCTAAGTTCATTCAATGAGACTGAGCTTGCAAATCTTCACAAGGAGTTGAGACCCCATATCCTTCGGCGAGTTATCAAGGATGTGGAGAAATCCTTACCACCCAAAATTGAACGTATTCTTAGGGTTGAGATGTCCCCACTGCAGAAACAGTATTATAAGTGGATCTTAGAACGGAACTTTCATGATTTGAATAAAGGAGTTCGAGGAAACCAGGTTTCCTTACTGAATATTGTCGTGGAGTTGAAGAAGTGCTGCAATCATCCATTCTTATTTGAAAGTGCAGATCATGGATATGGTGGGGAAGCAAGTGACGGAAGTAAACTTGAGCGGATTATTTTAAGTAGTGGAAAGCTAGTCATACTTGATAAGCTGCTTGTGAGATTGCATGAGACAAAACACCGTGTTCTTATATTCTCTCAGATGGTGAGAATGTTGGACATATTAGCAGAGTATCTGTCACTCAGAGGGTTCCAGTTCCAAAGACTTGATGGTAGTACAAAGGCCGAGTTGCGTCAACAGGCTATGGAACACTTTAATGCTCCAGGAAGTGATGATTTCTGCTTCCTTCTTTCTACTCGTGCTGGTGGACTGGGCATAAATCTGGCTACTGCAGACACAGTCATTATATTTGATTCTGATTGGAATCCTCAAAATGACTTGCAGGCAATGAGTAGAGCCCATAGGATTGGACAACAAGAAGTAGTTAATATCTACCGTTTTGTTACAAGTAAAAGTGTCGAAGAAGATATACTCGAAAGAGCCAAGAAAAAGATGGTACTTGATCATCTAGTAATCCAGAAACTGAATGCTGAGGGCAGACTGGAGAAGAAAGAGGCTAAGAAGGGCGTCACCTTTGACAAAAATGAACTTTCAGCAATTTTGAGGTTTGGGGCTGAGGAGCTGTTCAAGGAAGAGAAAAATGAGGAGGAAAGCAAAAAGAGACTCCTAAGCTTGGATATTGATGAAATTCTGGAGAGAGCAGAAAAGGTTGAGGACAAGGGGGCTGAAGCAGAGGAAGGAAATGAGCTTCTCAGCCAGTTCAAGGTTGCAAACTTTTGCAATGCAGAAGATGATGCTAGTTTCTGGAGCCGTTGGATAAAGCCAGATGCTATTGCACAAGCAGAGGAAGCATTGGCCCCTAGAGGTGCAAGATTTACCAAGAGTTATGTGGAGCCTGTGCAAGCTGACGGTGGCAACAAAAGGAAAAAGAAGGAGTCTCCTCCAGCTAGGGTTAATTCAAAACGTCGGCGGGGAGAATCTGGTCATTTAGTGCCAATGATTGATGGAGCTTCTGCTCAAGTAAGACATTGGTCATATGGGAATTTATCAAAAAGAGATGTATCTCGTTTTGCAAAAGCTGTAATGAAGTTTGGGAACGCAAGCCAAATAAGCTTAATTGCAGCTGAGGTTGGGGGTGCTGTTGAGGCAGCTTCAGTAGAAGCTCAGATTGAACTGTTTGATGCTTTAGTTGATGGATGTCAAGAGGCAGTTAAAGGAGAAATTATGGACCCAAAGGGACCTTTATTAGACTTCTTTGGTGTTCCTGTAAAGGCTAATGATATGCTAAGTCGTGTAGAAGAGCTACAACACTTAGCAAAGAGGATTAGCCGCTATGAAGATCCCGTTTTACAGTTTCGGGTGCTAAGGTATCTGAAGCCTGCTAATTGGTCAAAAGGATGTGGCTGGAATCAAATTGATGATGCCAGATTACTTTTGGGTGTGCATTATCACGGATTTGGCAACTGGGAAAAAATTCGGTTGGATGAAAGGCTTGGTTTAACAAAGAAAATCGCACCTGTGGAGCTTCAAACACATGAAACTTTCCTTCCACGTGCTCCCAATCTGAAGGATCGTGCTTCTGCTCTTCTGGAAATGGAAGTTGCGGCTGTTGCTGGGAAAAAGTCTAACCCTAAGGGTCGCAACAAATCCTCAAAGAATGTGGAGAATATTCCGAATCTACCTAAAGGTCGTGGTCGAGGTAGAGGGGGGAGGCAAAGTTCCCCGAAAGTCCCTACCCAAATGGAGAAAACGAGGTCTCAAAGGTCCCAGAGAGTTGAGCCATTGGTTAAGGAGGAAGGTGAAATGTCTGATAATGAAGAAGTATATGAGCAATTCAAGGAAGTGAAGTGGATGGAATGGTGTGAGGATGTCATGATAGATGAGGAAAGGACACTGAAACGTCTTCAGAAACTTCAAACTACCAGTGCCGACCTTCCCAAGGAGAAGGTACTCTTAAAGATTCGAAAATATCTGCAACTTTTAGGACGGAGAATAGACCAGATAGTTCTTGAGCATGAGCGTGAACCACATAAGCAAGATCGGATGACGATGCGATTATGGAAATATGTCTCAACTTTTTCTAATTTGACGGGAGACAGATTGCGTCAAATTTATTCCAAGCTTAAACAGGAACAAGAAGAGGAAGCTGGTGTGGGTCCATCCCAGTTTAATGGAAATCATGCTTTTCAACGTCAGTCGGCAAGACTGAAAGGACATAAAAATACTAACACTTATCAAACAGGTGAACCCGTTATTAAAGCTCATGATCCTGGGAAGTTTGAAGCATGGAAACGGAGGAGGAGAGCTGAGACCGACGCTTTCTTGGAGGCACAAGGACCTTTTCAAAGACCAAGTAATCCTCCCTCGAGATTACCTGCATCCAGTTCCTTGGGGATACTGGGTGCTGCACCAACTGATGCCAGCAGCAGACCTTATGGCAGTGAGAGGCCATATAAAATGCGTCAGGCTGGTTTTACACAGAAGCCGGGTTTCCCTTCAGGCATCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65693.p1 GENE.R_Transcript_65693~~R_Transcript_65693.p1 ORF type:complete len:1727 (+),score=460.78,SNF2_N|PF00176.19|8.7e-67,Chromo|PF00385.20|2.6e-05,Chromo|PF00385.20|3.7e-17,Chromo|PF00385.20|1.3e+04,Chromo|PF00385.20|2.7e+03,Helicase_C|PF00271.27|3.5e-22,DUF4208|PF13907.2|1.5e+04,DUF4208|PF13907.2|1.8e-17,HDA2-3|PF11496.4|9.6e-11,ResIII|PF04851.11|4.5e-08 R_Transcript_65693:584-5764(+)
MAFFRDYSSETVTHRAMDDKNGSNNAVNRVHSPIEIDLNSSENDFEMKMNGHYQSDGEPDINRLPNDVAVNVGAEMGLSTSQVTYERRGGGSAGKWGSSFWKGCQPMGPREVSDSGHESRSGSEYRNDEGSDGNSSGGGDRLELDDYDGQKEAEKLPADEMLSDEYYEQDGDDQNDMLHYRGLNSASLDPSRQSRTVMATSAGPRNRRRPYDDEDYEDDDEEEDEVDEDDPDDVDFDPDAGAADAHPRDKDGDWEAEDSDEDVESEGDIEISEDDDDDDAYYKKRPRGGQRGKSGRNVKAGKVQRSQAAPTRRRKGRVLDDDFSAEDSEDESDEDFRKKRGAHVHKTSNVGRKNETRTSGRAVRKVSYVESDESEEVDECKNKKKEEIEEEDGDTIERVLWHQPKGMAEEAIRANKSTDPVLLSHLFDSEPNWNEIEFLIKWKGQSHLHCQWKSLAELQNLSGFKKLLNYMKKVAEDVRFRKSVSREEIEVHDVSKEMDLDLFKQNCQVERIIADRISKDGSGGVSPEYLVKWQGLSYAEATWEKDVDIAFAQDLIDEYKAREATMAIQGKTVDAQRKKIRGSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSVLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQFEFSNTKNTGRMIKFDALLTTYEVILKDKAVLSKIKWNYLMVDEAHRLKNCEASLYTTLSEFSTKNKLLITGTPLQNSVDELWALLHFLDPDKFRNKDDFVQNYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGEASDGSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGVTFDKNELSAILRFGAEELFKEEKNEEESKKRLLSLDIDEILERAEKVEDKGAEAEEGNELLSQFKVANFCNAEDDASFWSRWIKPDAIAQAEEALAPRGARFTKSYVEPVQADGGNKRKKKESPPARVNSKRRRGESGHLVPMIDGASAQVRHWSYGNLSKRDVSRFAKAVMKFGNASQISLIAAEVGGAVEAASVEAQIELFDALVDGCQEAVKGEIMDPKGPLLDFFGVPVKANDMLSRVEELQHLAKRISRYEDPVLQFRVLRYLKPANWSKGCGWNQIDDARLLLGVHYHGFGNWEKIRLDERLGLTKKIAPVELQTHETFLPRAPNLKDRASALLEMEVAAVAGKKSNPKGRNKSSKNVENIPNLPKGRGRGRGGRQSSPKVPTQMEKTRSQRSQRVEPLVKEEGEMSDNEEVYEQFKEVKWMEWCEDVMIDEERTLKRLQKLQTTSADLPKEKVLLKIRKYLQLLGRRIDQIVLEHEREPHKQDRMTMRLWKYVSTFSNLTGDRLRQIYSKLKQEQEEEAGVGPSQFNGNHAFQRQSARLKGHKNTNTYQTGEPVIKAHDPGKFEAWKRRRRAETDAFLEAQGPFQRPSNPPSRLPASSSLGILGAAPTDASSRPYGSERPYKMRQAGFTQKPGFPSGIR*

Click here to download the sequence:
Link to NCBI Protein BLAST