Transcript Information: R_Transcript_65725.p1


Annotated TAIR IDAT5G20170.1
Annotated Gene NameRNA polymerase II transcription mediators
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6807554-6810729 | Reverse length=653
E-Value5E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.995544752603
Replicate 27.5562788126933
Replicate 39.9056162577956
Condition 2: 8 Hour
Replicate 111.668228673296
Replicate 213.104812686442
Replicate 316.266734979863
Condition 3: 24 Hour
Replicate 111.985085707777
Replicate 212.392357413625
Replicate 313.481331620806


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65725.p1 GENE.R_Transcript_65725~~R_Transcript_65725.p1 ORF type:complete len:703 (+),score=105.82 R_Transcript_65725:143-2110(+)
ATGGCGAATAACGACGAAGACATGGAAATCTCTCTCGATAAACTCCCTATCAAACGCCTTGACCACATCGAAGAAGCCGGCATCGAACACTTTCCTCCGGAGATCGGATACGAAGAGAAAACGGTGAATTTGATACGAAGAATCGATTTCGCATGGGCGGTGGAGAGAGACACGAAGAAGCAGAAAAAATCGAAGGAAGCTTCAGCTCCGTCCACGTTGCAAGGCTTGGTGGAGAATTTGCAGTTAGCTCATCAGGAGCTTTCTGTTATTATTGATCTCATCAATACTGTTGAAGCAAATGATGCAGTTGCTGTGGCTGGTATGAATAGGCCTAAGCCTTTGCCTAATGAAGTCCTATCAGACCTTTCTGTGTCTACTGCAACTAAGCTACAATGTTATCGGAATCTCAGTAAGTATTTTAAGCAGTCTGCCAAAGCTCTGGAACATCAAATTGCCAGGGAAGCGAGATTCTACGGAGCTCTCATACGACTGCAGCAGAACTGGAAAGTCAAACGACATCGCTTGGCAGCCAATGCTCCTGGCAGTGAAGGCTTCTTGATTGATCTTTCTGACAATTTAGCGCATGATCAGTCGGCAGTAACTCGTCCTCCAGCTTTTTCACTGGTTCGTGTGGAGCATGATTCTTCTGGAATGTTGGCTGTGAACATTCCTAAAAAATCATGCCATTCTCTCCATTTTGGTTTTCTTGAGGCTGATTTGGATGATAGATCAGAACGTGGTAATCTGACTCTCCACACAGCTGAGCGGCCTCAAAAAGCAATGAAAAAGGATGCACTTAGTGATGATGACTGTATCCGAGAAACACATACCGTCCTCCGTGATGCTCACAGAGCAATATTTTATGAGCAAGTATTTGAGTTAGTGAGCCGTGAATCATTCAATCCAAAGTTGGGGATTAATGTGTCTGGAATACGAGAAAATTATTTGGAACTAAAAATAAATCAAGGAGTATCTGTATTCATATCACTTGAGCCATCAGGACAAGATTATATCGCTGATAGCAAAGCCACCCAGAATGTAGAAGATATATCTGGTGGGGCTAGCTTAAGCTTGGTTGAAAGAAAGCTAGATACAAAGATGAAATCTGGACAACCTAATCACAGAACCTACGAGATATATCTGGAGCAGCTTTTCCATAATGAAATATTTGGAAAGATGAAGGACAGGCGAGCTTTATTTGGTAGAATTCAGTCTGCTCAGCAGGGGAAAGATGCTCTTGGACTTGTGAGTCATTTCTGCTTGTCTCTGGCTCACCGAATCTTCTCAAGCAAAGTTATGAAGGAGCTGGAAAACTTGGTTGTCAAGATTCCTTATCTCCAGTTAATAACACAACCTACATGGCATTCCCGAACTTCTTCATGGACATTATCTGTGAGAGTTCCTCAATCCATAGTAGATGCACGATCTCAGGCATGGAGATCAGATGAACATCAGATAGTAAGAACTTCCAAATCACTGTTCCAAACTAAGGTGGTGGCGAAAGACGATTCCATCAGCATTGAAGGGGGAGGTGCCCCTAGTGCTGTCACTTTGTTCAAGTCTAATCCAGAGTCTGTAGGCTCCAAGAACAGATTCAGTTGTGACCTGGTCGATCTTCCTACGGCACTTTTGTTGCAGGTGGCTAGTAAGATCGTAAATTGGCTTCACGATGAGGCATTGACGGTGGGTATAAAGACTAAGCCGGATTTTCTGTGCCTTTCTTTGGAGCTGGATCAATTGGAAACACTAAGCCTTGTCGCACATGTTGACCCAAACGATGCTCTGGGTTGTATTTCTTGGTGGTTGACGATAGAGAACGGAATTACCAAGGAACGCGAACTTCAGGCAGATCTCGCTGATGATGACGAGTCTGGTAGTAGGCGGTTTTTGGGTTATTTATCGTTGGACGAGCTGTACTCGACCATGATGGACCTTGTCAGTTTGTCCACCGGCAGCGTTAATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65725.p1 GENE.R_Transcript_65725~~R_Transcript_65725.p1 ORF type:complete len:703 (+),score=105.82 R_Transcript_65725:143-2110(+)
MANNDEDMEISLDKLPIKRLDHIEEAGIEHFPPEIGYEEKTVNLIRRIDFAWAVERDTKKQKKSKEASAPSTLQGLVENLQLAHQELSVIIDLINTVEANDAVAVAGMNRPKPLPNEVLSDLSVSTATKLQCYRNLSKYFKQSAKALEHQIAREARFYGALIRLQQNWKVKRHRLAANAPGSEGFLIDLSDNLAHDQSAVTRPPAFSLVRVEHDSSGMLAVNIPKKSCHSLHFGFLEADLDDRSERGNLTLHTAERPQKAMKKDALSDDDCIRETHTVLRDAHRAIFYEQVFELVSRESFNPKLGINVSGIRENYLELKINQGVSVFISLEPSGQDYIADSKATQNVEDISGGASLSLVERKLDTKMKSGQPNHRTYEIYLEQLFHNEIFGKMKDRRALFGRIQSAQQGKDALGLVSHFCLSLAHRIFSSKVMKELENLVVKIPYLQLITQPTWHSRTSSWTLSVRVPQSIVDARSQAWRSDEHQIVRTSKSLFQTKVVAKDDSISIEGGGAPSAVTLFKSNPESVGSKNRFSCDLVDLPTALLLQVASKIVNWLHDEALTVGIKTKPDFLCLSLELDQLETLSLVAHVDPNDALGCISWWLTIENGITKERELQADLADDDESGSRRFLGYLSLDELYSTMMDLVSLSTGSVNP*

Click here to download the sequence:
Link to NCBI Protein BLAST