Transcript Information: R_Transcript_65731.p1


Annotated TAIR IDAT1G30100.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 5
Annotated Gene Symbol(s)NCED5, ATNCED5
Annotation TypeOrtholog
Chromosome Positionchr1:10571383-10573152 | Forward length=589
E-Value4.8E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.34885598425
Replicate 27.5312816710634
Replicate 37.2206020683524
Condition 2: 8 Hour
Replicate 110.912178943881
Replicate 26.3193796507698
Replicate 38.6812050793155
Condition 3: 24 Hour
Replicate 16.9871587214752
Replicate 24.7946214979516
Replicate 38.8026638414696


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65731.p1 GENE.R_Transcript_65731~~R_Transcript_65731.p1 ORF type:5prime_partial len:92 (-),score=11.10,RPE65|PF03055.11|3e-18 R_Transcript_65731:201-476(-)
GAAACTGGTGAGGTAAGGAAGTTTTTTTACGGCGGTGAAAAGTACGGCGGTGAACCTATGTTTTTACCGCGACATAATAATGTAAGTGAAAGTGAAAGTGAATATGATGGATATATTATGGCATTTGTTCATGATGAGAAGGCTTGGAAGTCAGAATTCGTGATCGTAAATGCAATCACTATGGAAATTGAAGCCACCGTCAAGCTACCTTCAAGAGTACCATATGGGTTTCATGGTACCTTTGTGAGGAACGAGGATCTAAGACATCAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65731.p1 GENE.R_Transcript_65731~~R_Transcript_65731.p1 ORF type:5prime_partial len:92 (-),score=11.10,RPE65|PF03055.11|3e-18 R_Transcript_65731:201-476(-)
ETGEVRKFFYGGEKYGGEPMFLPRHNNVSESESEYDGYIMAFVHDEKAWKSEFVIVNAITMEIEATVKLPSRVPYGFHGTFVRNEDLRHQA*

Click here to download the sequence:
Link to NCBI Protein BLAST