Transcript Information: R_Transcript_65878.p1


Annotated TAIR IDAT2G39250.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SNZ
Annotation TypeOrtholog
Chromosome Positionchr2:16389010-16390931 | Reverse length=325
E-Value1.5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1568778069892
Replicate 21.0350288937612
Replicate 31.4518354814463
Condition 2: 8 Hour
Replicate 11.3794853491406
Replicate 21.5747099888159
Replicate 33.5791908265552
Condition 3: 24 Hour
Replicate 12.9101445781597
Replicate 20.93191234748918
Replicate 32.1579427156096


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65878.p1 GENE.R_Transcript_65878~~R_Transcript_65878.p1 ORF type:5prime_partial len:142 (+),score=19.53 R_Transcript_65878:3-428(+)
CAAGAAAAACCCATGATGCTGAGTGTGGGCATCACTGATACTGATATAATTAGATCACAAAGTTGTGATGATTATCACGATAAAGTCACAGCCTGTGACAGAGGAAATGTATCACTGCAGCCTCCAAATAAGGCTAACTATGTGATGAAGGAGTTGTTTCCCGTAGTGACTACTGTGAGGGATGAAGGTAACAGTACTGAGAGAGTAGTAGTGAAGAAGAAGAAGAGTAGAAGAGGACCCAGGTCTAGAAGCTCCCAGTATAGAGGTGTTACCTTTTATAGACGTACTGGTAGATGGGAATCTCATATTTGGGATTGTGGGAAACAAGTGTATTTAGGTGTGTTGAAATCCAATAATTTGTGGGTATTTATTACTATTTTGTTGATTCTAATTTTTGAGGCATTTCTTGGTGGAAGGTGGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65878.p1 GENE.R_Transcript_65878~~R_Transcript_65878.p1 ORF type:5prime_partial len:142 (+),score=19.53 R_Transcript_65878:3-428(+)
QEKPMMLSVGITDTDIIRSQSCDDYHDKVTACDRGNVSLQPPNKANYVMKELFPVVTTVRDEGNSTERVVVKKKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGVLKSNNLWVFITILLILIFEAFLGGRWI*

Click here to download the sequence:
Link to NCBI Protein BLAST