Transcript Information: R_Transcript_65902.p1


Annotated TAIR IDAT5G19060.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6373011-6374666 | Forward length=551
E-Value9.9E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6749938106349
Replicate 24.5998962042773
Replicate 38.4180237102468
Condition 2: 8 Hour
Replicate 13.6339446211459
Replicate 27.1112345077975
Replicate 38.1457757907744
Condition 3: 24 Hour
Replicate 15.5974865678855
Replicate 27.9102783653484
Replicate 37.4248044167567


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_65902.p1 GENE.R_Transcript_65902~~R_Transcript_65902.p1 ORF type:complete len:566 (+),score=91.95 R_Transcript_65902:340-2037(+)
ATGATAGAGATGATGAAGTCTGAAAAGTTAGCTAACTCGGCAACTCAGCTACCGATTCTGGGGTTAACTCGGCGAGTTGGGGTTCTAGTGGCAGCAACTATTTTGGCAATGTTGTTGGTTTGGAGCATTGATCACTCTACAGTTACCATTGTTTTGGAGATTTGGAGAACTGAAAACCCAGATGAAGGTGGCCCAGTTTCTGGTGAGCTACTTGACCCACCACAATGGGATATTGACCCGGTGAAGGCGGGTTCGGGTTTGGGCTGGGTTTCGGTGGAGCTTGAGAAGAACTACAGCTCAAGGTTTTTATCTAGGTGGTTAGCACTAGGGGGTGAACCTTGTAAGGAGTCGAAAACGGCTGAGATTAAGTTTGTGAACTTTGATGAGGAAAACCCAATTATGTTATCATGTGGGAAATCTCATGAGGTGGTTTTTCAAACATTGGATGAGTCAAGAAATGTTGTTTGTGTAGGAGGAGATTATTTTGAAATTGATTTGGCTGGGGAATTATGGAGATCAAGACCACCAATTAAGGATTTGGGTAATGGGACTTACTCATTTACCCTCCAAGTTCACCCTGATTTTGCTGGTTCTTATAACCTTACAATCATCCTGCTTTTCCGACATTTCGAAGGCCTTAAGATCTCAACTGCTAGATTTGGGTATGATAAGCTACTTAGAAGGATCCCTGTTGTGTTTTCAGAAAGTGAACACAATTTGCCTGAATTGAGGTTGTGTAGCAAGTCTGATTTCGAACAAGATCTTTGGGCCGGGAGGTGGACAAGGCATGCTAACAATGATGCTTGTGAAATTAGCAATGATGGTCGGTATAGGTGCTTGGAGCCTAACTATCCTTGCACAAACCCTTGGTGTAATGGCTCTTTAGGCATGCTCGAGAGTAATGGTTGGGTTTACTCTGCCCATTGCTCGTTTAGCCTGTTCTCGTCTGATGATGCTTGGAATTGCTTGAACAACCGATGGCTCTTCTTTTGGGGTGACTCAAATCATGTAGACACAATTCGGAACATTTTGTTCTTCTTTCTTGATGTGCCATACCAAGAGCTGCAAGTAGTAGGAAGGCGTTTTGACAGCACTTTTACCAACCCCAAAGACGGATCTCAATCTGTTAGGATTACAAACATATTCAATGGTCATTGGGAAGAAACCAAGAACTACCAAGGTCTTAATTCACTGTCAGATGAAGGGTATCGGGATTTGCTCAAGAGCTTCTTCAATGGCTCTTTTGTACCGGACACAATAATCTTCAATTCAGGTCTACATGATGGTATCTATTGGCGTAATGTTAGGAGATTCATTGGTGGTGCAGAATATGCAGCGTCATTCTGGAAAGGGATAATGGATGGGGTGAAAGCAAGGGGATTACAGGTATCGAACTTCATTTTCAGGTCGACAATTACAACTGGAGGGTATGCTCGAACTATGGCATTCAATCCCAGTAAGATGGAGGTGTTCAACGGGATCTTACTGGACAAATTGAGATCAGCTGGGCTGGTTACCGGAGTTATAGATGATTTCGACTTGACATGGGCATGGCATTTTGATAATAGGTGCAATGATGGCGTACATTATGGAAGGTTTCCAGCAAAAATGAAATGGAGAGACGGGCAAATCGGGCACCAATATTTTGTGGATTTGATGCTTGGACAAGTTCTTCTGAATGCCATTTGCCCCAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_65902.p1 GENE.R_Transcript_65902~~R_Transcript_65902.p1 ORF type:complete len:566 (+),score=91.95 R_Transcript_65902:340-2037(+)
MIEMMKSEKLANSATQLPILGLTRRVGVLVAATILAMLLVWSIDHSTVTIVLEIWRTENPDEGGPVSGELLDPPQWDIDPVKAGSGLGWVSVELEKNYSSRFLSRWLALGGEPCKESKTAEIKFVNFDEENPIMLSCGKSHEVVFQTLDESRNVVCVGGDYFEIDLAGELWRSRPPIKDLGNGTYSFTLQVHPDFAGSYNLTIILLFRHFEGLKISTARFGYDKLLRRIPVVFSESEHNLPELRLCSKSDFEQDLWAGRWTRHANNDACEISNDGRYRCLEPNYPCTNPWCNGSLGMLESNGWVYSAHCSFSLFSSDDAWNCLNNRWLFFWGDSNHVDTIRNILFFFLDVPYQELQVVGRRFDSTFTNPKDGSQSVRITNIFNGHWEETKNYQGLNSLSDEGYRDLLKSFFNGSFVPDTIIFNSGLHDGIYWRNVRRFIGGAEYAASFWKGIMDGVKARGLQVSNFIFRSTITTGGYARTMAFNPSKMEVFNGILLDKLRSAGLVTGVIDDFDLTWAWHFDNRCNDGVHYGRFPAKMKWRDGQIGHQYFVDLMLGQVLLNAICPS*

Click here to download the sequence:
Link to NCBI Protein BLAST