Transcript Information: R_Transcript_66027.p1


Annotated TAIR IDAT4G21980.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)APG8A, ATG8A
Annotation TypeOrtholog
Chromosome Positionchr4:11655868-11656809 | Forward length=137
E-Value8E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.918044239953
Replicate 225.426712430746
Replicate 321.225509148728
Condition 2: 8 Hour
Replicate 124.261223984426
Replicate 230.771855744751
Replicate 324.812752132456
Condition 3: 24 Hour
Replicate 120.851586381126
Replicate 221.043549767156
Replicate 320.682876905967


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66027.p1 GENE.R_Transcript_66027~~R_Transcript_66027.p1 ORF type:complete len:109 (+),score=16.69,Atg8|PF02991.12|8.9e-34 R_Transcript_66027:722-1048(+)
ATGTCGATTCTGATAAATTCAATATTTCAAAAATGCAATGCAATAATGCATGATGTATGCATTGCGTTGAAGGATTACCTTGAATCTTATATCCACTTTTGTACATGCAGGTATCTTGTCCCCGCTGATCTAACTGTGGGGCAGTTTGTCTACGTGGTGCGGAAGAGGATAAAGCTCAGTGCTGAGAAGGCTATATTCATATTTGTGAAGAACATCCTTCCACCCACTGCCGCCATGATGTCAGCGATATATGAGGAGCACAAAGATGAAGACGGTTTTCTCTACATGACATACAGTGGTGAGAACACATTTGGAGAAGCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66027.p1 GENE.R_Transcript_66027~~R_Transcript_66027.p1 ORF type:complete len:109 (+),score=16.69,Atg8|PF02991.12|8.9e-34 R_Transcript_66027:722-1048(+)
MSILINSIFQKCNAIMHDVCIALKDYLESYIHFCTCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGEAL*

Click here to download the sequence:
Link to NCBI Protein BLAST