Transcript Information: R_Transcript_6610.p1


Annotated TAIR IDAT5G13260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4243164-4246677 | Forward length=537
E-Value7E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4939897583269
Replicate 27.3627966224938
Replicate 38.4170730428815
Condition 2: 8 Hour
Replicate 17.9702312076604
Replicate 26.8658412364714
Replicate 38.2230450797055
Condition 3: 24 Hour
Replicate 112.59597812661
Replicate 211.54570599641
Replicate 312.412825812368


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6610.p1 GENE.R_Transcript_6610~~R_Transcript_6610.p1 ORF type:complete len:596 (+),score=129.46,Macoilin|PF09726.5|3.9e-06 R_Transcript_6610:714-2501(+)
ATGGAGACAAAGCAGCGAACGGAAAGCCCGATCTACGCAAGGAGGTGGACTTCAGAGCCTACGGTGGCGCGTGGTCTTCACTCTCGTTCATCATCAACAGTAGACTCCCCAACATCATCGCCATTGCGTGGACACCACTCTCGGACTTCTTCCACAACAAGCATTTCCAATGTCAAGCGCACTCAGAACTTCGCTGCAAGAGCTGCCGCCCAACGCCTTGCTCAAGTCATGGCTTCTCAGACTACCGACGACGACAACGATGAAGCTGATGACGCTGATCTCGGATTTCGTTACGCTTATGCTCCTGCCCTTGCATTGTCCCTTAGAAGCAATAATAATAACATTAGCAATAGCAATAGCAATGACAATGTCAGTGGCAAAACCAAGCCCTTGCTCCCTTCCTCTGCTAAGACGTCCGCTACCACTAACAGCACCAGATCTCCTTCTCCTGCTTCTTCAGCGAGGAGCTCAGTAGATGAAACGCCGTCGTTTCGCTCAGCATCAAACGGAAGAGCAGCAGCCGCAGCAGCAGCTCCACTGGGAGTAGGAGTGGCATCAGTGCGGACGGGTGCAGCAAAAGCAGTACCGCCAAACCCCAACGTTGCAGCTTTGAAAACCCAAGCTTCTCTCCCACCCCTTGATTCCCCTACTCTTAGGAATAATCATATTAAAGACCCCCGAAGATTCTTTGCAGATAAAGGACAAAACAATGTAAAAGATGTAGGATGTCAGCAGGAAACCTCTGCACTACGTGATGAACTTGATATGCTACAAGAAGAGAACAATAGTATACTTGGAAAGCTTAGAGCTGAAGAAGACAAATGCAAGCAAGTAGAGGCTAGAGTCAAAGAGCTTGAAAAACAGGTTGTCGCTCTTGGGGAGGGAGTCTCTTTAGAAGCTAAATTGCTGAGCAGAAAAGAAGCAGCATTGCGTCAAAGAGAGGCTGCACTGAGAGATGAAAAGCAATCAAAAGACAGCATTAACACAGAAATAGCTATTCTTCGCTCCCAAGCTACGAATGCAAAACATGACGTTGAAACAGCTGCATCACGGCTCCAGGGAGCTGAATCTGAAGTTAAGTCTCTCCGTACAATGACAGAAAGAATGGTTCTTACCCAGAAAGAAATGGAAGAAGTTGTTCTTAAGAGATGTTGGCTTGCACGTTATTGGGGTTTAGCTGCACAGCTTGGCATCTGTGCAGATATTGCTACGTCTAAGTATGAACACTGGTCATCACTAGCTCCTCTTCCTTTTGAAGTTGTTGTTTCAGCTGGGCAAAAGGCTAAAGAGGGAAACTGGGAAAAAGGTGATGAAGACCCTGACAGTAAAAGCAGACTTGTACAAGACTTGAATGATCTCACTGGGGAGGGAAATATCGAGAGTATGCTTTCTGTTGAGATGGGATTGAAGGAACTAGCTTTTCTGAAGGTTGAAGAATCCATTGCATATGCATTTGCTCAGCTTCGGCGTCCAAATTCTTCTAGATTGTCCATCTCAGATCTATCTCCAGGAGATGTCAAGTATCTGGAGGCCTTTGAGTTAAGTCTGGAGGAGTCTGAAGATGTTCTTTTCAAAGAGGCATGGCTGACATATTTCTGGGGAAGAGCTTTGACTCTTAGCATAGAAAAGGACATCGCTAAAGAAAGACTTCAATTTTGGATTGGTCGAAGCCGACATTCACCTACTTCACATGACGCAGTTGATGTTGACCAAGGCTTAACTGAGCTGAGAAAATTAGGGATTGAACGTCGTCTGTGGGAAGCATCTCGCAAAGATAGTGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6610.p1 GENE.R_Transcript_6610~~R_Transcript_6610.p1 ORF type:complete len:596 (+),score=129.46,Macoilin|PF09726.5|3.9e-06 R_Transcript_6610:714-2501(+)
METKQRTESPIYARRWTSEPTVARGLHSRSSSTVDSPTSSPLRGHHSRTSSTTSISNVKRTQNFAARAAAQRLAQVMASQTTDDDNDEADDADLGFRYAYAPALALSLRSNNNNISNSNSNDNVSGKTKPLLPSSAKTSATTNSTRSPSPASSARSSVDETPSFRSASNGRAAAAAAAPLGVGVASVRTGAAKAVPPNPNVAALKTQASLPPLDSPTLRNNHIKDPRRFFADKGQNNVKDVGCQQETSALRDELDMLQEENNSILGKLRAEEDKCKQVEARVKELEKQVVALGEGVSLEAKLLSRKEAALRQREAALRDEKQSKDSINTEIAILRSQATNAKHDVETAASRLQGAESEVKSLRTMTERMVLTQKEMEEVVLKRCWLARYWGLAAQLGICADIATSKYEHWSSLAPLPFEVVVSAGQKAKEGNWEKGDEDPDSKSRLVQDLNDLTGEGNIESMLSVEMGLKELAFLKVEESIAYAFAQLRRPNSSRLSISDLSPGDVKYLEAFELSLEESEDVLFKEAWLTYFWGRALTLSIEKDIAKERLQFWIGRSRHSPTSHDAVDVDQGLTELRKLGIERRLWEASRKDSVF*

Click here to download the sequence:
Link to NCBI Protein BLAST