Transcript Information: R_Transcript_6620.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value2.8E-274
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1292.7481870399
Replicate 2195.12268711481
Replicate 3234.06448276697
Condition 2: 8 Hour
Replicate 1219.04806931864
Replicate 2268.95496971981
Replicate 3295.27253506567
Condition 3: 24 Hour
Replicate 1259.94808602678
Replicate 2190.76066851955
Replicate 3248.06065311817


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6620.p1 GENE.R_Transcript_6620~~R_Transcript_6620.p1 ORF type:5prime_partial len:573 (+),score=124.99,Asp|PF00026.19|5.7e-133,SapB_1|PF05184.11|3.3e+03,SapB_1|PF05184.11|2e-14,SapB_2|PF03489.13|9.7e-13,TAXi_N|PF14543.2|3.5e-08 R_Transcript_6620:2-1720(+)
TCTCATCTGAAAAAGTCAGTACCCACACTTAGACTATCAGATAGTGCAACACGAGGCCTATTTATTTCTCTACCTCTCCTCGAAGAAAGGAACCACATCATCGTTAGTGTCTTCACTTTCGCTTTCCTCTCTCTTGTTGACTTCTCTTTCTCATCTCCTCTCAATCCTTCCCAGATGGGTGCTCCATTTAGAACAATACTTTCCTCTTGTCTTCTATTGCTCCTTCTGTCACCCCTTGTATTGGCTGCGTCGAATGATCGCCTGGTTAGAATCGGTTTGAAAAAGAAAAAGTTTGATCAAGTTGACCGAGCTGCTGCTCGATACAGCTCTAAGGAGGGAGAATATATTAAGAAGTCATTGGGGAGATATGGTCTCGGTAACAACATTGGGGGTTATGATGATTCGGATATCGTTCCTTTGAAGAACTATTTGGATGCTCAGTACTTTGGTGAGATTGGTATTGGTACTCCTCCACAGAAGTTCACTGTGATTTTCGACACTGGGAGCTCCAATCTCTGGGTTCCTTCCTCCAAGTGTTATTTTTCTATTGCTTGTCTTTTCCACTCCAAGTACAATTCCAGGCGATCAAGTTCTTATACTAAAAATGGAACATCTGCTGCCATTCATTATGGTACTGGAGCCATTTCAGGATACTTTAGTGAAGATCATGTTACAGTGGGAGACCTTGTTGTTGAGAATCAGGACTTTATTGAAGCAACAAGAGAGCCTAGTCTCACATTTGTGGTAGCTAAGTTTGACGGTATACTTGGGCTTGGGTTTCAAGAAATCTCTGTTGGCAAAGCTGTTCCAGTCTGGTACAATATGGTCAACCAGGGTCTTGTGAAAGAACCTGTATTTTCGTTTTGGCTAAACCGAAATGCTGATGAGGAAGTAGGTGGTGAACTTGTTTTTGGTGGGGTTGATCCTGCCCATTTCAATGGAGAGCACACTTGGGTTCCTGTGTCTCAGAAAGGCTATTGGCAGTTTGATATGGATGATGTTCTGGTTGGCGGTGAGACAACTGGCTTTTGCAATGGATGTTGTTCCGCAATAGCTGATTCTGGGACTTCTTTGGTGGCTGGCCCAACGGCTGTGGTTGCCCAAATTAATCATGCAATTGGCGCTACTGGTGTAGTAAGTATGGAATGCAAGACAGTGGTTTCACAATATGGGAAACAAATACTGGATATGTTGCTATCAGAGACTCAACCTCTGAAGGTATGCTCCCAAATTGGTTTATGCAGCTATGATGGCAAGCGAAGTGTTAGCATGGGCATTGAAAGTGTGGTTGACGTGAATGCTGACAAGTCTTCTGGCGGCCTTCATGATGCTATGTGCTCTGCTTGTGAAATGGCAGTTGTATGGATGCAAAAACAGCTGAAACAAAATCAGACTGAAGAACTAATTCTGGATTATGCTAACCAGCTTTGCGATCGGTTGCCTAGTCCAATGGGAGAGTCGGCTGTTGATTGTGACAGTCTTTCTTCGTTGCCGAGTGTTTCTCTCACTATTGCTGGGAAAACATTTGATCTCAGCCCTGAGACGTATGTCCTCAAAGTGGGTGAAGGAGCTGCAGCACAATGCATCAGTGGATTCACAGCCTTAGATGTGCCACCTCCTCGCGGACCACTCTGGATTTTGGGAGACATTTTCATGGGTCAATATCACACTGTGTTTGATTATGGAAACTTGAGAGTTGGATTTGCTGAAGCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6620.p1 GENE.R_Transcript_6620~~R_Transcript_6620.p1 ORF type:5prime_partial len:573 (+),score=124.99,Asp|PF00026.19|5.7e-133,SapB_1|PF05184.11|3.3e+03,SapB_1|PF05184.11|2e-14,SapB_2|PF03489.13|9.7e-13,TAXi_N|PF14543.2|3.5e-08 R_Transcript_6620:2-1720(+)
SHLKKSVPTLRLSDSATRGLFISLPLLEERNHIIVSVFTFAFLSLVDFSFSSPLNPSQMGAPFRTILSSCLLLLLLSPLVLAASNDRLVRIGLKKKKFDQVDRAAARYSSKEGEYIKKSLGRYGLGNNIGGYDDSDIVPLKNYLDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSIACLFHSKYNSRRSSSYTKNGTSAAIHYGTGAISGYFSEDHVTVGDLVVENQDFIEATREPSLTFVVAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVKEPVFSFWLNRNADEEVGGELVFGGVDPAHFNGEHTWVPVSQKGYWQFDMDDVLVGGETTGFCNGCCSAIADSGTSLVAGPTAVVAQINHAIGATGVVSMECKTVVSQYGKQILDMLLSETQPLKVCSQIGLCSYDGKRSVSMGIESVVDVNADKSSGGLHDAMCSACEMAVVWMQKQLKQNQTEELILDYANQLCDRLPSPMGESAVDCDSLSSLPSVSLTIAGKTFDLSPETYVLKVGEGAAAQCISGFTALDVPPPRGPLWILGDIFMGQYHTVFDYGNLRVGFAEAA*

Click here to download the sequence:
Link to NCBI Protein BLAST