Transcript Information: R_Transcript_66202.p1


Annotated TAIR IDAT1G19220.1
Annotated Gene Nameauxin response factor 19
Annotated Gene Symbol(s)ARF19, IAA22, ARF11
Annotation TypeOrtholog
Chromosome Positionchr1:6628395-6632779 | Reverse length=1086
E-Value3.5e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7993796972752
Replicate 23.2005379881593
Replicate 34.6276237567985
Condition 2: 8 Hour
Replicate 15.9584519844077
Replicate 26.6528243494436
Replicate 39.1174756743358
Condition 3: 24 Hour
Replicate 16.7039326890816
Replicate 25.0429379832449
Replicate 37.6375829026823


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66202.p1 GENE.R_Transcript_66202~~R_Transcript_66202.p1 ORF type:complete len:1089 (+),score=186.20,Auxin_resp|PF06507.9|4.5e-34,B3|PF02362.17|1.4e-19,B3|PF02362.17|5.8e+03,B3|PF02362.17|5.2e+03,AUX_IAA|PF02309.12|1.6e+04,AUX_IAA|PF02309.12|8.3e-08 R_Transcript_66202:368-3634(+)
ATGAAGTCTTCAGCTAGTAGCAACAACTCTGGTCCTCAACCTGCTGCTACTAATCCTTCTGAAGTAGAGAAGAAGAACATTAATCCGGAGTTATGGCAAACGTGTGCAGGACCTCTGGTAAATTTACCAGCTGCTGGGACCCACGTTGTGTATTTTCCTCAGGGTCACAGTGAACAGGTAGCAGCATCTATGAAGAAGGATGTGGATGCTCAGATACCAAACTATCCGAATTTGCCTTCAAAACTACTATGCTTACTTCACAATGTGACATTGCACGCAGATCCAGAAACGGATGAAGTATATGCTCAGATGACACTCCAACCTGTTCCCACTTTTGATAAAGAGGCATTGTTGAGATCTGACCTATCACTTAAGGCACATAAACCACAAACAGAATTTTTCTGCAAGACCTTAACTGCCAGTGATACAAGCACCCATGGAGGCTTCTCTGTACCACGTAGAGCAGCAGAGAAAATATTCCCCCCCCTCGATTACTCTACGCAACCACCCGCGCAAGAACTTGAGACCAGGGACTTGCATGATCATGTGTGGACTTTCCGCCACATATATCGCGGACAGCCAAAAAGGCACCTGCTTACAACAGGATGGAGCCTATTTGTTAGCGGAAAGAGGCTTTTTGCTGGCGACTCAGTTTTGTTTATAAGAGATGAGAAACAGCAGCTTCTTTTAGGCATTAGACGTGCTAATAGACAACCAACTAATTTGTCGTCATCAGTTCTCTCAAGCGACAGCATGCATATTGGAGTCCTTGCTGCTGCTGCACATGCAGCTGCAAACAACAGTCCGTTCACAGTTTTCTACAATCCAAGAGCTAGTCCATCGGAGTTCGTGATTCCACTAGCCAAGTATTACAAGTCTATTTATGGTCAGCAAGTATCCCTTGGCATGCGATTTAGGATGATGTTTGAAACTGAAGAGTCGGGAACTAGAAGGTATATGGGTACTATTACAGGTATTACTGATCTGGATCCTGTACGCTGGAAGAACTCACAATGGCGTAATTTGCAGGTTGGCTGGGATGAGTCAACTACTGGAGAAAGACGTAATAGGGTCTCTGTTTGGGAGATTGAACCTGTGACAGCTCCGTTTTTTATATGTCCTCCGCCATTCCTCAGACCAAAGCGTCCGAGATTACCAGGAATGCCAGATGATGACCTCGATCTGGACAATTTATTCAAGAGGACAATGCCTTTTCTAGGGGATGATCCACATGCTTTAACGGGCTTGAGCTTAGTGCAGTGGATGAACATGCAGCAAAACCCATCATTGGCTAATCCAATGCAGTCGAATTTCTTAAATAATTTGCCTGGATCTACTTTACAAACCCTTCCTGCTGCTGAACTGTCCCGTCAATTAGGGTTTGGCTCACCACAGATTCCTCAACAAAGCAACACACAGTTCAATTCTCAGAGACCAGTACAGTCGATTCAGCAGCTCGACCAGCTCCAGAAGGTTTCAGGAGCGCTGAACCCAATGAACTCTCTCATACAGTCACAGCAACAGTTATCTGATATATCTCAGCAACCAAGACAAAACCTGATCAACCAAAGCCTAGCTTCAAGTCAAGTTCAGTCTCAGCTGCTTCAGTCTCAGGCTCTTGTACAAATCCCTAATTCACTCCAACAGTCCTCGTCTCTAAATAACCATCAGCTCCCGGGAAATCTGCCTCAGATACTGCCTCAACAGCAGCTGCAGCAAAATTTGGGACAAAATCAGCAACAAAGTTTACTGCAATCACAGCTTCCTGATCTTGCAAATCAACAAGCACAGGTTACTGACAGTCAAATGCAGCTTCAAATATTGCAAAGGCTTCAACAGCAACAGCAATCACTATTATCTCAGCAGCCTGTTTCACAGCAAGTAAATCACGTAAATCAACTCCAAGGGCCACAGAGAGCTCTGCTCGATGTTTCTCAAGGCTTTCCTCGGTCGTTCCAGCCCTCACAAATGTCCGATATACCTCAAACACAAATGACGTCTCTCTCTCAGTCCCAGATCCTTGCACCGCAAATAACCAAGACTAACAATCAGATAAACTTGCAATTCCCTCAACCATCTCAGGTGCCACAGCAGGGTCCGTCAGGGCTTGTGTTGAACCCTATGTCAAATCATCTTGCCACAGCCGGGAGCAGCAATTTGACAGGAGCTGCTGCAGCTGGGCAATCTGCAATCACAGACGAGTTTCCATCTTGTTCAACTTCACCATCCACAAATAACTGTCCTATCGTTGCTCAAACAATCATGACTAGTACTAGTCATCGAAGCGGTACCATGGGAGAGGGGATTATTCAACCCTCTACCAATCTTTTGAGTTCTAACTCTTTGGAGACCATGTCAGCTAATGCGCACTTGGTTAAAGACGTGCATCAGAAAGCGGATGTCAAACCTTCTGTAAACATTGCCAAGGTTCAAAGCCAAGGACATTTAGCTCGGCAACATTATCATACCGTCCCTTCCTCTCAAACGGATTACTTAGACACATCCTCGGCAACTTCAGCTTCTCTATCTCAGAATGATATTATGAGCCTGAACAATCCACTATCCAATTCACATTCAATTTTGTTAGGAGATGCAGGTCATGATGTGGAGGTACAAGCTGACCTTAGAAACAATTTTCACACAGGTGGAAATATTAATGGTCCTATGGGAACTTCCTTGGTTTCTGACATGCTCACGAAGAATACACCTGGGCCTCATAAGAATTTCTCAAATAACGTCTCTTCTGGTGGTATGCTTGGTAACTATGATAGCTCAAAAGATGCCCAACAAGAGCTCTCATCGTCAATGGTCACACAATCATTTGGTGTTCCAGATATGGCATTCAATTCAATTGATTCTGCTATAAGTGATAGCAGCTTTATGAATAGGGGCGCATGGGGCCAGCCTCCACAGTATCAACGGATGCGTACATACACAAAGGTCTACAAGCGTGGAGCGGTTGGTAGATCCATTGATGTTACTCGTTATGCGGGTTATGAGGAGCTTAAACAAGATCTGGCTCGTATGTTTGGTATAGAAGGCCAAATGGAAGACCGTGGGAGAGTTGGCTGGAAACTTGTGTACGTGGATCATGAGAATGATGTCCTGCTAGTTGGTGACGACCCTTGGGAGGACTTTGTGAATTGCGTTCGGTGCGTAAAGATCCTTTCACCTCAAGAGGTTCAACAAATGAGCCTTGATGGCGATTTTGGTAATGCTTCTTTACCCAATCAAGCTTGTAGCAGTTCAGATGGTGGCAATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66202.p1 GENE.R_Transcript_66202~~R_Transcript_66202.p1 ORF type:complete len:1089 (+),score=186.20,Auxin_resp|PF06507.9|4.5e-34,B3|PF02362.17|1.4e-19,B3|PF02362.17|5.8e+03,B3|PF02362.17|5.2e+03,AUX_IAA|PF02309.12|1.6e+04,AUX_IAA|PF02309.12|8.3e-08 R_Transcript_66202:368-3634(+)
MKSSASSNNSGPQPAATNPSEVEKKNINPELWQTCAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPTFDKEALLRSDLSLKAHKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSTQPPAQELETRDLHDHVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKSIYGQQVSLGMRFRMMFETEESGTRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTTGERRNRVSVWEIEPVTAPFFICPPPFLRPKRPRLPGMPDDDLDLDNLFKRTMPFLGDDPHALTGLSLVQWMNMQQNPSLANPMQSNFLNNLPGSTLQTLPAAELSRQLGFGSPQIPQQSNTQFNSQRPVQSIQQLDQLQKVSGALNPMNSLIQSQQQLSDISQQPRQNLINQSLASSQVQSQLLQSQALVQIPNSLQQSSSLNNHQLPGNLPQILPQQQLQQNLGQNQQQSLLQSQLPDLANQQAQVTDSQMQLQILQRLQQQQQSLLSQQPVSQQVNHVNQLQGPQRALLDVSQGFPRSFQPSQMSDIPQTQMTSLSQSQILAPQITKTNNQINLQFPQPSQVPQQGPSGLVLNPMSNHLATAGSSNLTGAAAAGQSAITDEFPSCSTSPSTNNCPIVAQTIMTSTSHRSGTMGEGIIQPSTNLLSSNSLETMSANAHLVKDVHQKADVKPSVNIAKVQSQGHLARQHYHTVPSSQTDYLDTSSATSASLSQNDIMSLNNPLSNSHSILLGDAGHDVEVQADLRNNFHTGGNINGPMGTSLVSDMLTKNTPGPHKNFSNNVSSGGMLGNYDSSKDAQQELSSSMVTQSFGVPDMAFNSIDSAISDSSFMNRGAWGQPPQYQRMRTYTKVYKRGAVGRSIDVTRYAGYEELKQDLARMFGIEGQMEDRGRVGWKLVYVDHENDVLLVGDDPWEDFVNCVRCVKILSPQEVQQMSLDGDFGNASLPNQACSSSDGGNV*

Click here to download the sequence:
Link to NCBI Protein BLAST