Transcript Information: R_Transcript_6629.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value2.1E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.438354191975
Replicate 251.09589192218
Replicate 356.385815621298
Condition 2: 8 Hour
Replicate 146.346205914133
Replicate 267.916617806678
Replicate 362.409383834664
Condition 3: 24 Hour
Replicate 155.22717263168
Replicate 245.550021857929
Replicate 359.540679183238


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6629.p1 GENE.R_Transcript_6629~~R_Transcript_6629.p1 ORF type:5prime_partial len:429 (+),score=94.67,Asp|PF00026.19|2.4e-132,SapB_1|PF05184.11|5.9e+03,SapB_1|PF05184.11|4.8e-14,SapB_2|PF03489.13|1.1e-13,TAXi_N|PF14543.2|3e-06,TAXi_N|PF14543.2|7.6e+03 R_Transcript_6629:2-1288(+)
GCTCAGTACTTTGGTGAGATTGGGATCGGTTCCCCGCCTCAGAAGTTCACTGTTATTTTTGACACAGGTAGCTCTAACCTGTGGGTGCCATCTTCAAAGTGCTACTTCTCGATTGCTTGCTTTTTCCACTCCAAGTACAAGTCCAGCTCCTCTAGTACCTATAAGAAGAATGGAACTTCTGCTGCTATTCGTTATGGTACTGGAGCTATATCAGGTTTCTTCAGCGAAGATAATGTGCAAGTTGGTGAACTCGTCGTTAAAAATCAGCAATTCATCGAGGCAACTAGAGAACCCAGTATCACATTTATGGTCGCCAAGTTTGACGGCATACTTGGGCTGGGTTTCCAAGAGATAGCTGTTGGGGGTGCTGTCCCTGTGTGGTACAATATGATGGAGCAAGGGCTGGTCAAAGAGCCAGTATTTTCATTCTGGCTCAATCGTAATCCCGAAGATGAAGAGGGTGGTGAGCTTGTATTTGGTGGGATTGATCCAAACCACTATCGAGGCGAGCATACATATGTTCCCGTTACAAGGAAGGGTTATTGGCAGTTTGATATGGGCGATGTTCTCATTAGTGGGAAGACAACAGGGTATTGTACTGGTGGATGTGCAGCGATTGCTGATTCTGGAACTTCTTTGTTGGCTGGTCCTACGACGGTTATCGCTCAAATAAATCATGCAATTGGTGCAACTGGTGTTGCCAGTCAGGAGTGCAAGGCTGTAGTTGATCAGTACGGGCAGACAATCATTGATCTGCTCTTTTCAGAGGAATCTCCAAAGAAGGTCTGCTCACAAATTGGTGTCTGCTCCTTTGATGGCACTCGAGGTGTAAGCATGGGGATCGAGATGGTGGTGGAAAAGGGAAGTTCTGCATCATCATCTGGTGGGTTGAGTGATGGTATGTGCTCAGCTTGTGAGATGGCTGTTGTGTGGATCGAGAATCAGCTCAAGCAAAATGTGACCCAGGACCATGTAATGAACTATGTGAATGAGCTATGCGATCGCCTTCCCAGTCCAAACGGACAATCAGCTGTCAACTGTAACCATGTTTCTTCCATGCCTCCTGTTTCCTTTACGATTGCGAACAAAGTGTTTGAACTTACTGCTGAGGAGTATATCCTCAAGGTTGGTGAGGGACCTGCAGCCCAATGCATCAGTGGCTTTACGGCTTTGGATGTTCCACCTCCTCGTGGCCCTCTTTGGATCCTAGGAGATGTCTTCATGGGTCGGTATCACACTGTGTTCAACTATGGAAACCTCAGGGTCGGTTTTGCAGAAGCCGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6629.p1 GENE.R_Transcript_6629~~R_Transcript_6629.p1 ORF type:5prime_partial len:429 (+),score=94.67,Asp|PF00026.19|2.4e-132,SapB_1|PF05184.11|5.9e+03,SapB_1|PF05184.11|4.8e-14,SapB_2|PF03489.13|1.1e-13,TAXi_N|PF14543.2|3e-06,TAXi_N|PF14543.2|7.6e+03 R_Transcript_6629:2-1288(+)
AQYFGEIGIGSPPQKFTVIFDTGSSNLWVPSSKCYFSIACFFHSKYKSSSSSTYKKNGTSAAIRYGTGAISGFFSEDNVQVGELVVKNQQFIEATREPSITFMVAKFDGILGLGFQEIAVGGAVPVWYNMMEQGLVKEPVFSFWLNRNPEDEEGGELVFGGIDPNHYRGEHTYVPVTRKGYWQFDMGDVLISGKTTGYCTGGCAAIADSGTSLLAGPTTVIAQINHAIGATGVASQECKAVVDQYGQTIIDLLFSEESPKKVCSQIGVCSFDGTRGVSMGIEMVVEKGSSASSSGGLSDGMCSACEMAVVWIENQLKQNVTQDHVMNYVNELCDRLPSPNGQSAVNCNHVSSMPPVSFTIANKVFELTAEEYILKVGEGPAAQCISGFTALDVPPPRGPLWILGDVFMGRYHTVFNYGNLRVGFAEAE*

Click here to download the sequence:
Link to NCBI Protein BLAST