Transcript Information: R_Transcript_6636.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value1E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7191090797853
Replicate 24.4992072320639
Replicate 38.3297227622372
Condition 2: 8 Hour
Replicate 17.0754609750157
Replicate 27.9860292289949
Replicate 39.0168715094779
Condition 3: 24 Hour
Replicate 18.944600218586
Replicate 26.7311504406307
Replicate 310.091084628375


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6636.p1 GENE.R_Transcript_6636~~R_Transcript_6636.p1 ORF type:internal len:308 (+),score=72.97,Asp|PF00026.19|8.9e-71,SapB_1|PF05184.11|4.1e+03,SapB_1|PF05184.11|6.1e-14,SapB_2|PF03489.13|6.8e-14 R_Transcript_6636:3-923(+)
TCTGGTTTCTTCAGTGAAGATAATGTGGAAGTTGGCCAACTCATGGTTAAAAATCAGCAATTCATCGAGGCAACTAGAGAACCTGGTATCACATTCATGGTTGCCAAGTTTGATGGCATACTTGGACTGGGGTTCAAAGAGATAGCTGTCGGGGGTTCTGTCCCTGTGTGGTACAATATGATGGAGCAAGGGCTGGTCAAAGAGCCAATATTTTCGTTCTGGCTCAATCGTAATCCAGATGATGAAGAGGGTGGTGAGCTTGTATTTGGTGGGGTTGATCAAAAACACTATCGAGGCGAGCACACATATGTTCCCGTTACAAGAAAGGGTTATTGGCAGTTTGATATGGGTGATGTTCTCATTAACGGGAAAACAACAGGGTATTGTGCTGGTGGATGTGCAGCTATTGCTGATTCTGGAACTTCTTTGCTGGCTGGTCCTACGACCGTTATCGCCCAAATAAATCAAGCAATTGGTGCAACTGGTGTTGCCAGTCAGGAGTGCAAGGCTGTAGTTGATCAGTACGGGCAGACAATCATTGATCTGCTCTTTTCAGAGGAATCTCCAAAGAAGGTCTGCTCACAAATTGGTGTCTGCTCCTTTGATGGCACCCGTGGTGTTAGCATGGGGATTGAGACTGTGGTGGAAAAGGAAAGTTCTGGATTATCATCTGTTGGTTTGCATGATGGTAAGTGCTCAGCTTGTGAGATGGCTGTTGTGTGGATCGAGAATCAGCTCAAGCAAAATGTGACCCAGGACCATGTAATGAACTATGTGAATGAGCTATGCGATCGCCTTCCCAGTCCAAACGGACAATCAGCTGTCAACTGTAACCATGTTTCTTCCATGCCTCCTGTTTCCTTTACGATTGCGAACAAAGTGTTTGAACTTACTGCTGAGGAGTATATCCTCAAGGTTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6636.p1 GENE.R_Transcript_6636~~R_Transcript_6636.p1 ORF type:internal len:308 (+),score=72.97,Asp|PF00026.19|8.9e-71,SapB_1|PF05184.11|4.1e+03,SapB_1|PF05184.11|6.1e-14,SapB_2|PF03489.13|6.8e-14 R_Transcript_6636:3-923(+)
SGFFSEDNVEVGQLMVKNQQFIEATREPGITFMVAKFDGILGLGFKEIAVGGSVPVWYNMMEQGLVKEPIFSFWLNRNPDDEEGGELVFGGVDQKHYRGEHTYVPVTRKGYWQFDMGDVLINGKTTGYCAGGCAAIADSGTSLLAGPTTVIAQINQAIGATGVASQECKAVVDQYGQTIIDLLFSEESPKKVCSQIGVCSFDGTRGVSMGIETVVEKESSGLSSVGLHDGKCSACEMAVVWIENQLKQNVTQDHVMNYVNELCDRLPSPNGQSAVNCNHVSSMPPVSFTIANKVFELTAEEYILKVG

Click here to download the sequence:
Link to NCBI Protein BLAST