Transcript Information: R_Transcript_66365.p1


Annotated TAIR IDAT5G66920.1
Annotated Gene NameSKU5 similar 17
Annotated Gene Symbol(s)sks17
Annotation TypeOrtholog
Chromosome Positionchr5:26722963-26725370 | Forward length=546
E-Value4E-299
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.884458723948
Replicate 243.661438019104
Replicate 345.474743397907
Condition 2: 8 Hour
Replicate 119.190400624089
Replicate 222.650209332661
Replicate 331.002011484728
Condition 3: 24 Hour
Replicate 140.017028125185
Replicate 231.146428451758
Replicate 337.706729700903


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66365.p1 GENE.R_Transcript_66365~~R_Transcript_66365.p1 ORF type:complete len:541 (+),score=82.53,Cu-oxidase_3|PF07732.11|2.2e-39,Cu-oxidase_3|PF07732.11|1.8e+03,Cu-oxidase|PF00394.18|5e+03,Cu-oxidase|PF00394.18|1.6e-36,Cu-oxidase|PF00394.18|4.1e+03,Cu-oxidase_2|PF07731.10|2.6e+03,Cu-oxidase_2|PF07731.10|1.5e+02,Cu-oxidase_2|PF07731.10|6.4e-27 R_Transcript_66365:238-1860(+)
ATGGAAGAAAGAAGTCGGAATTATTTCATATATGGAGCAGTAGTAGCATTGTTATGCATTTCAGTTGGTGTAAAAGCAGATGACCCATATAGATACTACACTTGGACTGTCACTTATGGTAACATTGCTCCTTTGGGTGTCCCTCAACAGGTGATTCTTATTAATGGTCAATTTCCGGGTCCTAGGATTGACTGTGTCACCAATGACAACATTGTCCTCAATGTTATTAATAAATTGAACGAGCCCTTCCTCTTGACTTGGAATGGAATAAAGCAAAGGAAGAACTCATGGCAAGATGGAGTATTGGGGACCAACTGCCCTATCCCTCCAAACTCAAACTACACCTACAATTTCCAGCCAAAAGATCAGATTGGTTCCTACACATATTTCCCATCAACAGGACTTCACCGAGCAGCTGGTGGCTTCGGAGCCCTTAATGTGTATGCTAGGCCTCGTATCCCAGTCCCATATGCTGAACCTGCTGGTGACTTCACTTTGCTTATAGGTGACTGGCACAAGACTAACTATAAGACTCTGCAAGGAGCTCTGGATGCAGGAAAGGCTCTTCCATTCCCTGATGGCCTGCTTATTAATGGCCAAACTCACAGTTCTTTCACTGGAGATCAAGGGAAAACGTACAGGTTCAGAGTCTCAAATGTGGGATTGTCAACAACATTTAATTTCAGAATCCAGAATCACAAATTGAAGGTGGTTGAAGTTGAAGGATCCAATGTGCTCCAGAATGTGTACGATTCTGTAGATGTGCATGTTGGTCAGTCTCTTACAATACTGGTGACCTTAGATCAGGCTCCCAAGGACTACTTCATTGTCGCATCTACACGGTTCACAAGGATAGTTCACACTGCAACTGCTGCTCTCCACTACTCAAGCTCTCGCTCACCCGCCTCTGGACCTTTGCCTGCTGCCCCAGCTGGCCAATTTCATTGGTCTATGCAGCAAGCCAGAACTTTGAGGTGGAACCTGACGGCAAATTCAGCTAGGCCCAACCCTCAGGGATCTTTCCACTATGGCACAATCCCAATTTCTAAGACCTTTGTCTTAGCCAACTCAGCACCTCTTATCAACGGGAAGCAGCGATACGCTGTTAACAGGGTGTCCTTCGTCTACCCTGACACTCCTCTGAAGCTTGCCGATTACTTCAACATTCCTGGAGTCTTCAGCTTGAATTCCATCCAGAGCACCCCATCTGATGGCACTGCAACCGTTGGCACCTCTGTTCTGGGGGCTAATCTCCATGATTTCATCGAGGTTGTCTTCCAGAACGATGAGAAAGTCATGCAATCTTGGCATCTTGACGGTTATGATTTCTGGGTTGTTGGTTTTGGCGCTGGCAAGTGGAAACCAGCCAGTCGAAGGGGTTACAACCTAAAAGATGCTCTCACCAGGCATACCACCCAGGTGTATCCAAACTCATGGACGGCCATATTGGTGTCATTGGACAACCAAGGGATGTGGAACGTGAGGTCGTCAATGTGGGCAAGGCAATACCTAGGACAGCAACTGTATCTCAGGGTGTGGAACCCTGTGAAGAGCTTTGCCAATGAGTATGATCCTCCTACTAACATCCTCCTCTGTGGAAAAGCAGCGGGACAACACCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66365.p1 GENE.R_Transcript_66365~~R_Transcript_66365.p1 ORF type:complete len:541 (+),score=82.53,Cu-oxidase_3|PF07732.11|2.2e-39,Cu-oxidase_3|PF07732.11|1.8e+03,Cu-oxidase|PF00394.18|5e+03,Cu-oxidase|PF00394.18|1.6e-36,Cu-oxidase|PF00394.18|4.1e+03,Cu-oxidase_2|PF07731.10|2.6e+03,Cu-oxidase_2|PF07731.10|1.5e+02,Cu-oxidase_2|PF07731.10|6.4e-27 R_Transcript_66365:238-1860(+)
MEERSRNYFIYGAVVALLCISVGVKADDPYRYYTWTVTYGNIAPLGVPQQVILINGQFPGPRIDCVTNDNIVLNVINKLNEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYNFQPKDQIGSYTYFPSTGLHRAAGGFGALNVYARPRIPVPYAEPAGDFTLLIGDWHKTNYKTLQGALDAGKALPFPDGLLINGQTHSSFTGDQGKTYRFRVSNVGLSTTFNFRIQNHKLKVVEVEGSNVLQNVYDSVDVHVGQSLTILVTLDQAPKDYFIVASTRFTRIVHTATAALHYSSSRSPASGPLPAAPAGQFHWSMQQARTLRWNLTANSARPNPQGSFHYGTIPISKTFVLANSAPLINGKQRYAVNRVSFVYPDTPLKLADYFNIPGVFSLNSIQSTPSDGTATVGTSVLGANLHDFIEVVFQNDEKVMQSWHLDGYDFWVVGFGAGKWKPASRRGYNLKDALTRHTTQVYPNSWTAILVSLDNQGMWNVRSSMWARQYLGQQLYLRVWNPVKSFANEYDPPTNILLCGKAAGQHH*

Click here to download the sequence:
Link to NCBI Protein BLAST