Transcript Information: R_Transcript_66394.p1


Annotated TAIR IDAT5G01520.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:206797-208399 | Forward length=242
E-Value1.2E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.405006385486
Replicate 218.117775359225
Replicate 319.858663641826
Condition 2: 8 Hour
Replicate 121.128931849639
Replicate 228.85275076282
Replicate 329.130407366589
Condition 3: 24 Hour
Replicate 118.051501650816
Replicate 213.517739320031
Replicate 320.916879075785


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66394.p1 GENE.R_Transcript_66394~~R_Transcript_66394.p1 ORF type:complete len:248 (+),score=38.48,zf-C3HC4_3|PF13920.2|6.2e+03,zf-C3HC4_3|PF13920.2|2.2e-10,zf-RING_2|PF13639.2|9.4e+02,zf-RING_2|PF13639.2|1.5e-08,zf-C3HC4_2|PF13923.2|8.4e+03,zf-C3HC4_2|PF13923.2|5.3e-07,zf-C3HC4|PF00097.21|3.6e+03,zf-C3HC4|PF00097.21|8.9e-07 R_Transcript_66394:131-874(+)
ATGTACGTTGCTTCTATGCGAAAGTCTTTCAAGGATTCTCTCAAAGTCCTGGAAGCAGATATTCAACATGCTAATACTCTAGCCTCTGAATTTCCTAGAGAGTATGATGGGGCCTGCCTTCAAATGAGAATGTCTTATGCTCCTGCTGCCCACTTTCTGCTCTTCTTGGTCCAGTGGACCGACTGTCACTTGGCTGGGGCGTTGGGTCTTTTAAGGATTCTCATCTATAAAGTTTATGTTGATGGCACCACTACCATGTCGACCCATGAAAGGAAAGCAAGTATCAGAGAGTTCTATGCTGTCATATATCCTTCCTTGTTACAACTTCAAAGTGGTGTTACTGACAATGAGGATAAAAAGCAGAAGGCTGTATGCATGGAGAGATACAGGAAGAGAGATGAGGATGAATATAGACACTACTCGGATATGGACATTGAAAGAGAGGAAGAGTGTGGAATTTGCATGGAGACGAATGGTAAAATTGTGCTCCCTAACTGCAACCATGTGATGTGCTTGAAATGCTACCGTGAATGGCGCTCAAGATCGCAATCATGCCCATTCTGCCGAGACAGCCTCAAGAGGGTGAACTCTGGCGATCTTTGGGTGTTCACTGATAGTAGGGACGTGGTTGATATGGCAACGCTAACGAAGGAAAATTTGAGAAGGCTGTTTATGTACATAGAGAAACTGCCCCTGATTGTTCCAGATTCGTTATTCGACGGCTATGATTCTCACCTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66394.p1 GENE.R_Transcript_66394~~R_Transcript_66394.p1 ORF type:complete len:248 (+),score=38.48,zf-C3HC4_3|PF13920.2|6.2e+03,zf-C3HC4_3|PF13920.2|2.2e-10,zf-RING_2|PF13639.2|9.4e+02,zf-RING_2|PF13639.2|1.5e-08,zf-C3HC4_2|PF13923.2|8.4e+03,zf-C3HC4_2|PF13923.2|5.3e-07,zf-C3HC4|PF00097.21|3.6e+03,zf-C3HC4|PF00097.21|8.9e-07 R_Transcript_66394:131-874(+)
MYVASMRKSFKDSLKVLEADIQHANTLASEFPREYDGACLQMRMSYAPAAHFLLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQSGVTDNEDKKQKAVCMERYRKRDEDEYRHYSDMDIEREEECGICMETNGKIVLPNCNHVMCLKCYREWRSRSQSCPFCRDSLKRVNSGDLWVFTDSRDVVDMATLTKENLRRLFMYIEKLPLIVPDSLFDGYDSHLK*

Click here to download the sequence:
Link to NCBI Protein BLAST