Transcript Information: R_Transcript_66418.p1


Annotated TAIR IDAT1G79490.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)EMB2217
Annotation TypeOrtholog
Chromosome Positionchr1:29900617-29903127 | Forward length=836
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4828489221951
Replicate 24.2291126430932
Replicate 35.2652927649924
Condition 2: 8 Hour
Replicate 16.295536366768
Replicate 25.1133296153422
Replicate 39.140325253157
Condition 3: 24 Hour
Replicate 19.2484057552363
Replicate 26.9510650057981
Replicate 39.4137876793172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66418.p1 GENE.R_Transcript_66418~~R_Transcript_66418.p1 ORF type:complete len:844 (+),score=138.65,PPR_2|PF13041.2|6.5e+02,PPR_2|PF13041.2|5.5e+02,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|6.1e-07,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|4.9e+02,PPR_2|PF13041.2|5.7e+02,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.4,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.12,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|0.00078,PPR|PF01535.16|0.03,PPR|PF01535.16|0.048,PPR|PF01535.16|6.3,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1e+04,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|4.6e-05,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|9.1e+03,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|6.9e+03,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|60,PPR_1|PF12854.3|2.8e-06,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.0087,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|0.094 R_Transcript_66418:264-2795(+)
ATGCTCTTAAATAATTTCATATATCTCTTTCCCTTTAATGCCATGTTTCATCGTAGAATATTGTGCCGCAAAAGCTTATTTCTTCTTACAAAAAACCCTAGGTTATTATCACCATTTTATGTGCAAAATCGACATTTAGTTGCATCTGTAGAAGGAAATGACCATCAAAGACTGTTCAGCGGTGCAAAAGATGATCAGGGTTCTCATTTGATACCTCAAAGTTTTGGTCATTTAGCAAAAAACCACAATTTTTTGAGGAGCTATTGCTCGGGAAAACCTGAAAGTGAAAATGGTTCGAGTGAATGGACGGAAGAGATAGAGTATTTAGATGAGTCGGGTAGCCTTATTTGCTCTGGTAAGGGTGTTAGAACTGTTGAGCCTGGCCTCGATGACCATGTCATGTCTGGTGGGGTAAAGAAGCCGCTTATGAATGCTTCAGCTGTTGCCAAGATTGTTGAGATAGTTAAGCGGTGGAAGTGGGGTCCAGAGATGGAAAACCAGCTCGATAAGCTTCAGTTTGTACCCAATATGACTCATGTAATTCAGGCAATGAAAGTGATTAATGATGGTGAAATGTCGGTTAATTTGTTTCAGTGGGCAAAGAGGCAACCTTGGTATGTACCTAATGATGAATGCTATTTGTTGTTGTTAGATGGGTTGAATAAGAACAGGGATATTGATAGGATGCAATTGTCATTGTTTGATGAAATGATTGGTGATTCTGTTGATAATAATGGGATGTCTTCGTTTAGTGCATATAATCAAGTTATTCAGAATTTAGCTAAGGCAGAGAAGTTAGAGGTTTCGTTTTGTTGTTTTAAGAAGGTTCAGGAATCTGGTTTTAAGATTGAGACCCAGACGTATAATTATCTTATAACCTTGTTTTTGAATAAAGGTTTGCCTTACAAGGCGGTTGAGGTATATGAGAGTATGGAAGCGGCTGGGTGTTTGTTGGATGGTTCGACATATGAGTTGATGATACCAAGCTTGGCGAAATCTGGTCGCCTTGATGCTGCCCTTAAACTTTTTGAAGAGATGAAACAGAGGAAATTTCAACCTAGCTTTTCTATTTTTGCGGCATTAGTTGATTTGATGGGGAAGGCTGGGAGGCTGGACATGTCAATTAAGCTGTACATGGAAATGCTGGGTCTTGGATATAGACCTTCTGCGACCATGTTTGTTTCACTCATAGAGTCGTATGTCAAATCAGGGAAGTTAGAAGCAGCTCTTCGGCTTTGGGACGAGATGAAGAAAGCAGGTTTCAGGCCAAACTATGGACTTTATACGATGGTGGTTGAGTCTCATGCTAAATCAGGGAAGCTTGAAATTGCAATGTCTGTTTTCCAGGATATGGAGAAAGCGGGGTTTTTACCTACCCCATCTACCTACTCTTGCCTGTTGGAAATGCACGCTGCCTCAGGACAAGTGGATCCTGCCATGAAGCTGTATAACTCAATGACAAATGCAGGTTTGCGACCAAGTCTGAGCACTTACACTGCACTGTTGACCCTTTTAGCTAATAAGAAACTAGTGGATGTGGCTGCTAAAATTTTACTTGAAATGAAAGCGATGGGATATTCTGCAGATGTTAGTGCTAGTGATGTTCTAATGGTATATATCAAAGATGGGTCAGTTGATATTGCTTTAAGGTGGCTACGTTTTATGAGTTCATCCGGGATAAGAACCAACAATTTCATCATCCGTCAGCTATTTGAATCATGCATGAAGAATGGAATGTATGAATCAGCAAAACCACTTCTGGAAACATATGTGAACTCAGCTGCAAAAGTTGATCTCATACTGTACACATCAATTCTGGCTCACCTTGTCAGATGTCAGGATGAACAAAATGAAAAGCACTTGATGTCAATTCTTGGTGCTACAAAGCACAAAGCACATGCCTTCATGTGTGGTCTCTTCACAGGTCCAGAACAAAGGAAACAACCAGTTTTATCTTTTGTTCGGGAGTTCTTTCAGGGAATTGATTATGAATTAGAAGAAGGAGCTACTAGGTATTTTGTTAATGTACTCCTCAACTATCTTGTCCTTATGGGTCAGATAAACCGCGCACGTTGTGTTTGGAAAGTTGCCTATGAGAATAAGCTTTTCCCAAAGGCCATAGTGTTTGATCAACACATTGCATGGTCCCTTGACGTAAGGAACTTATCAGTTGGAGCTGCCCTCATTGCAGTTGTACACACCCTTCACAGGTTCAGAAAACGGATGCTTTATTACGGTGTTGTGCCCAGAAGGATCAAACTTGTTACTGGCCCAACTCTGAAGATCGTGATTGCCCAGATGTTAAGCACGGTTGACTCACCATTTGAGGTTAGTAAGGTTGTTTTGAGAGCTCCAGGAGACTCTGTCTTAGAATGGTTTAAGAAACCTATTGTTCAGAAATTCCTCTTGAATGAGACCCCATCTCGAGCTGATATTCTCATGCACAAGTTGAATATACTTTTTCCTAGTTCTGCACCTGAAATCAGATCTTTATCTCCGCCTAAGCCTCTTGTTGCAGGCAAGGCTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66418.p1 GENE.R_Transcript_66418~~R_Transcript_66418.p1 ORF type:complete len:844 (+),score=138.65,PPR_2|PF13041.2|6.5e+02,PPR_2|PF13041.2|5.5e+02,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|0.032,PPR_2|PF13041.2|6.1e-07,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|4.9e+02,PPR_2|PF13041.2|5.7e+02,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.4,PPR|PF01535.16|0.0011,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|0.12,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|0.00078,PPR|PF01535.16|0.03,PPR|PF01535.16|0.048,PPR|PF01535.16|6.3,PPR|PF01535.16|4.4e+02,PPR|PF01535.16|1e+04,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|4.6e-05,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|9.1e+03,PPR_3|PF13812.2|1.2e+04,PPR_1|PF12854.3|6.9e+03,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|60,PPR_1|PF12854.3|2.8e-06,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|0.0087,PPR_1|PF12854.3|0.089,PPR_1|PF12854.3|0.094 R_Transcript_66418:264-2795(+)
MLLNNFIYLFPFNAMFHRRILCRKSLFLLTKNPRLLSPFYVQNRHLVASVEGNDHQRLFSGAKDDQGSHLIPQSFGHLAKNHNFLRSYCSGKPESENGSSEWTEEIEYLDESGSLICSGKGVRTVEPGLDDHVMSGGVKKPLMNASAVAKIVEIVKRWKWGPEMENQLDKLQFVPNMTHVIQAMKVINDGEMSVNLFQWAKRQPWYVPNDECYLLLLDGLNKNRDIDRMQLSLFDEMIGDSVDNNGMSSFSAYNQVIQNLAKAEKLEVSFCCFKKVQESGFKIETQTYNYLITLFLNKGLPYKAVEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAALKLFEEMKQRKFQPSFSIFAALVDLMGKAGRLDMSIKLYMEMLGLGYRPSATMFVSLIESYVKSGKLEAALRLWDEMKKAGFRPNYGLYTMVVESHAKSGKLEIAMSVFQDMEKAGFLPTPSTYSCLLEMHAASGQVDPAMKLYNSMTNAGLRPSLSTYTALLTLLANKKLVDVAAKILLEMKAMGYSADVSASDVLMVYIKDGSVDIALRWLRFMSSSGIRTNNFIIRQLFESCMKNGMYESAKPLLETYVNSAAKVDLILYTSILAHLVRCQDEQNEKHLMSILGATKHKAHAFMCGLFTGPEQRKQPVLSFVREFFQGIDYELEEGATRYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSTVDSPFEVSKVVLRAPGDSVLEWFKKPIVQKFLLNETPSRADILMHKLNILFPSSAPEIRSLSPPKPLVAGKAL*

Click here to download the sequence:
Link to NCBI Protein BLAST