Transcript Information: R_Transcript_66486.p1


Annotated TAIR IDAT1G71270.1
Annotated Gene NameVps52 / Sac2 family
Annotated Gene Symbol(s)POK, TTD8, ATVPS52
Annotation TypeOrtholog
Chromosome Positionchr1:26863736-26869817 | Forward length=707
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.179029131839
Replicate 221.144161686835
Replicate 324.907044259478
Condition 2: 8 Hour
Replicate 118.79548788204
Replicate 223.022260036488
Replicate 329.170405236425
Condition 3: 24 Hour
Replicate 129.263120480383
Replicate 225.348015851706
Replicate 327.652494512883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66486.p1 GENE.R_Transcript_66486~~R_Transcript_66486.p1 ORF type:complete len:710 (+),score=141.85,Vps52|PF04129.8|4.5e-200,Sec3_C|PF09763.5|2.3e-09 R_Transcript_66486:317-2446(+)
ATGGCTGAAGTTACTCCTACCAAATTGCAGCAGGATGGCTTAAATGGAGGGAAAATTGATTCCCAAGTGGATGTTCTTGACTTGGGGGCCTTTGTTGGAGATTTGTCCATCGAGGACGATGGAGGCAGTGATGATGTATCACTTGAAGGGCTGCAACAAGAACTGGAGGAATGTAAAAATGATGATGTGGTGGCTAATATCTTGTCAAAAGGTATCAAACTACGTGACTATACAAAGACTGTCGAAAACAATTTGCGTGAGGTTGAATTAGACTCTATTCAGGATTATATTCAGGAAAGTGATAATCTTGTGTCGCTTCATGATCAAATCCATGACTGTGATAACATCTTAACACAGATGGAATCCCTTCTGAGTGGGTTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATAAAAGTTTTGCAAGAGAAGTCAATGGACATGGGCCTGAAGCTGAAGAACCGCAAGGCAGCAGAATCAAAGTTGGCCAAGTTTGTTGAAGATATTATTGTCCCACCTAGGATGGTTGACGTTATTGTGGATGGAAAGGTTAATGAGGAGTACATGAGAACTCTTGCAATACTCAGTAAGAAATTAAAGTATGTAGCTGCAGATCCTTTGGTTAAGACATCAATGGCTCTAAAAGATGTCCAGCCTGAGTTGGAAAGACTTCGTCAGAAAGCTGTTTCAAAGGTTTTTGATTTTATAGTTCAGAAGCTTTATGCATTGAGAAAGCCTAAGACAAACATACAAATTCTTCAACAAAGTGTTCTCTTGAAATACAAGTATGTTATTACCTTTCTCAAAAAGCATGGGAAGGAGATTTATACCGAGGTCCGGGCTGCGTATATTGATACAATGAATAAAGTCCTCAGTGCTCATTTTCGTGCATATATACAAGCCCTAGAGAAATTGCAGCTTGATGTAGCGACATCCAGTGATTTAATTGGTATTGAAGCTAGAAGCACAGGTCTTTTCTCTGCTATAAGAGAACCCTTGAAGAATCGATCCTCCGTTTTTGCGCTGGGGGACAGAATAAACATTTTGAAGGAAATTGATCAGCCTGCATTGATTCCCCATATAGCGGAAGCGAGCTCTCAGAAGTATCCTTATGAGGTCCTTTTCCGGAGCTTGCACAAGCTGCTAATGGATACTGCTAGTTCTGAGTACCTTTTTTGTGATGATTTTTTCGGAGAAGAGTCCTTATTTAATGAGATATTTGCAGGTCCATTTGCAGTAATTGATGAGCATTTCAACATGATTTTATCAAATTCTTTTGATGCCATTGGTCTAATGCTTATGATTCGCCTTACTCATCAGCACCAGCTTATCATGTCAAGAAGGCGGATTCCTTGCTTGGACCCATACTTGGACAAGGTGAACATTTCATTGTGGCCTCGTTTTAAGATGGTCTTTGACATGCACATCAGTAGTCTGCGTAGTGCAAATGTTAAAACGTTGTGGGAAGATGATGTTCATCCTCATTATGTGATGAGACGTTATGCTGAGTTTACTGCTTCCCTCATTCATCTCAATGTTGCATATGGAGATGGCCAGTTAGAGTTGAACTTGGATAGACTTAGAATGGCAGCTGATGATTTAATAATGAAGCTATCCACACAGTTTCATAAATCTAAACTGCAGACTGTGTTTCTTATAAACAACTATGACATGACAATTTCTGTCTTAAAGGAAGCTGGTCCAGAAGGTGGTAAGATTCAGTTGCATTTCGAGGAAGTGCTGAAGAGCCAAACAACAATATTTGTGGAAGAACTACTGCTGGAGCACTTCAGTGATCTGATCAAGTTTGTGAAAATTAGGGCATCTGAGGATACAAGTTCAAGCTCTGAGAAGTCCATAGCCATCACTGAAGTCGAACCGTTGGTGAAGGATTTTGCCAGCAGATGGAAAGACGCAATAGAGCTGATGCACAAAGATGTTATTACATCCTTCAGCAATTTCTTGTGCGGCATGGAGATATTAAGAACTTCACTGACCCAGTTGCTACTCTACTATACTAGGCTCTCTGACTGCGTGAAAAAGGTCCAGGGAGGATCTGCTCTCAACAAGGATCTTGTTTCTATTCAGCTAATTATACACGAGATCAGGAAATACTCGAGGACTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66486.p1 GENE.R_Transcript_66486~~R_Transcript_66486.p1 ORF type:complete len:710 (+),score=141.85,Vps52|PF04129.8|4.5e-200,Sec3_C|PF09763.5|2.3e-09 R_Transcript_66486:317-2446(+)
MAEVTPTKLQQDGLNGGKIDSQVDVLDLGAFVGDLSIEDDGGSDDVSLEGLQQELEECKNDDVVANILSKGIKLRDYTKTVENNLREVELDSIQDYIQESDNLVSLHDQIHDCDNILTQMESLLSGFQAEIGSISSDIKVLQEKSMDMGLKLKNRKAAESKLAKFVEDIIVPPRMVDVIVDGKVNEEYMRTLAILSKKLKYVAADPLVKTSMALKDVQPELERLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVITFLKKHGKEIYTEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDVATSSDLIGIEARSTGLFSAIREPLKNRSSVFALGDRINILKEIDQPALIPHIAEASSQKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEESLFNEIFAGPFAVIDEHFNMILSNSFDAIGLMLMIRLTHQHQLIMSRRRIPCLDPYLDKVNISLWPRFKMVFDMHISSLRSANVKTLWEDDVHPHYVMRRYAEFTASLIHLNVAYGDGQLELNLDRLRMAADDLIMKLSTQFHKSKLQTVFLINNYDMTISVLKEAGPEGGKIQLHFEEVLKSQTTIFVEELLLEHFSDLIKFVKIRASEDTSSSSEKSIAITEVEPLVKDFASRWKDAIELMHKDVITSFSNFLCGMEILRTSLTQLLLYYTRLSDCVKKVQGGSALNKDLVSIQLIIHEIRKYSRTF*

Click here to download the sequence:
Link to NCBI Protein BLAST