Transcript Information: R_Transcript_66511.p1


Annotated TAIR IDAT5G23430.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7894073-7899862 | Reverse length=837
E-Value1.1e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.369559065557
Replicate 210.013216927623
Replicate 313.841274652357
Condition 2: 8 Hour
Replicate 110.424069846455
Replicate 210.580242469175
Replicate 316.180087369483
Condition 3: 24 Hour
Replicate 122.585208608528
Replicate 217.814921975285
Replicate 320.985964044366


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66511.p1 GENE.R_Transcript_66511~~R_Transcript_66511.p1 ORF type:complete len:801 (+),score=150.94,Katanin_con80|PF13925.2|2.3e-51,WD40|PF00400.28|0.00049,WD40|PF00400.28|0.0017,WD40|PF00400.28|7.1e-06,WD40|PF00400.28|1.1e-10,WD40|PF00400.28|1.3e-07,WD40|PF00400.28|1.4e+02,eIF2A|PF08662.7|0.022,eIF2A|PF08662.7|0.00025,eIF2A|PF08662.7|0.034 R_Transcript_66511:544-2946(+)
ATGACGACTAAGCGTGCTTATAAGCTGCAGGAATTTGTAGCTCATACTTCCACAGTCAACTGCCTGAAGATCGGGAGGAAGTCTTCTCGTGTTTTGGTTACTGGAGGAGAGGACCACAAGGTCAATCTTTGGGCTATTGGAAAACCCAATGCCATACTGAGTTTGTCAGGTCACTCAAGTGGGATTGATTCGGTAGGCTTTGATTCTTCCGAGGTTTTGGTCGCTGCAGGAGCTGCAAGTGGAACTATCAAGCTTTGGGATCTAGAAGAGGCAAAGATTGTTCGCACTCTCACTGGCCATAGATCCAACTGTATATCCGTGGACTTCCATCCCTTTGGAGAGTTCTTTGCATCTGGATCTTTGGACACAAATCTAAAAATATGGGATATTAGAAGGAAGGGGTGTATCCACACTTACAAAGGCCACACACGAGGAGTCAATGCAATTAGGTTTACTCCAGATGGGCGCTGGGTTGTGTCTGGCGGTGAGGACAACACTGTCAAGCTTTGGGATTTGACGGCCGGCAAGCTATTACATGATTTCAAGTCTCATGAGGGGCAGATTCAGTGCATAGATTTTCATCCGCACGAGTTCCTTTTGGCAACAGGTTCTGCTGATAAAACAGTGAAATTCTGGGACCTTGAGACTTTTGAGCTTATTGGTTCAGCAGGGCCTGAGACCTCCGGAGTGCGTTGTATGACCTTTAATCCCGATGGAAGGACCCTACTTTCTGGATTGCATGAAAGCTTAAAGGTCTATTCTTGGGAACCCATACGTTGCTACAATACAGTGGATGTTGGATGGTCTAGGTTGTCAGATCTTAATATCCACGAGGGAAAGCTTCTTGGCTGCTCATATAATCAGAGCTGTGTTGGAGTGTGGGTGGTGGACATCTCGCGGATAGAGCCATATTCAGTTCGAATGCATTCCAATGGCCATTCAGATTCCAAGTCTACTTCATGTGGGAATTCGTCAGCGCTAACTGAAAACAGTGCTACGGTTGGCCGGCTACCATCATCTCAGAATAGCGATCCAGTAGAAAAAGAGACCAAATCTGCAGGAAGGGTTCAAACGTCCACAAACTCTAGCTGTGCAAATAAAGATTCCAAAGTCTCAGCAACCACTGTTGGAATGCCGGGGACCCCTCAGCGGGTCACTCTGAGCACCACTCCAAAGAATACAGTATCTGTAGCAGCAGTTTCTGGTACTATGGTCCAGAAAAGAAATTCCTTAAGGACCCAATCAGCTGCCAATGCTTGTACATTCAACAAATCTGATATTGTGCCCATCATTGTCCCGAGAAACGATGTAAAGTTGGAGCAGACAGCTGAATACAAGAGAGAAGTTTTTTCCAGGAGAACTATTTCTCATCCCTCACAGTCAAAATTTACTGACTTGCGAAGAATTTCAAATGCCAGTGAAGAATCTGATGGATCATCCATCTGTGTCCAACCAGAGCCCACAAGCGTTAAGGCTTCAGAATTTGTTGGAGTCCCAAATAAGAGTATATTACCTGCAGTTAGGAACCTCAATATTAGTCTTCCTGTTTCAGAAAGGAACATGAAGGACGACAAATGTGCTGGCTCTGTGAAGGTTGAAAATAATTCCTCATTACAGCCTCTTGCCAGCTGCCAATATGAAGCTTATGAAATACGTTTGCCTAAATCAACCAAAGATGCCAACTCTTTAGAATTCCAGCGTTCTGTGAAAACACGCTCTTTGGTTGCAAACTGGGAGAAAAAAGAGAGATCTCCTACATTTGAGGGTTCTGCTTCAAGCAATGCTGCTGCTATTATGATCAATGTTGATTCAAGCGCTCTTAGTATGAAGTCAAAACATGGGTACTCTTTATCAGTTGAAAAAGACGCAACTTCTCTTACTGATGATGATGTTATTGCTGAGATAACTGGGAGACATAATCAATTTCTTAGTTCCATGCAATCACGCCTGGATAAATTACAGGTAGTGCATAGACTTTGGGATCGAAATGATATCAAAGGTGCTATTGGTGCTATGGAAAAGATGGCTGACCGTGGAGTTGTTGCTGAAGTAGTTAGCTTTCTGACAGAAAAAATTGACATCATTACATTGGAAATTTGCACATATCTCCTGCCGCTTCTTGCAAGCCTTCTTGAAAGTGACATGGATAGGCATCTAGGTATTTCACTGGATATGTTGATTAAGCTTGTCAGAGTATTTGGTTCAGTCATTCATTCAGCAATATCAGCGTCATCCTCTGTGGGTGTAGATATTGAGGCAGAGGAAAGATTGGAGCGTTGCAACCTCTGTTATATTGAACTTGAAAGGGTTAAACGTTGCCTGCCTGCTCTAATGAGAAGAGGGGGTGCAGTAGCAAAGTCTGCACAGGAGCTGAATCTAGCGCTGAATGCAACTTGTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66511.p1 GENE.R_Transcript_66511~~R_Transcript_66511.p1 ORF type:complete len:801 (+),score=150.94,Katanin_con80|PF13925.2|2.3e-51,WD40|PF00400.28|0.00049,WD40|PF00400.28|0.0017,WD40|PF00400.28|7.1e-06,WD40|PF00400.28|1.1e-10,WD40|PF00400.28|1.3e-07,WD40|PF00400.28|1.4e+02,eIF2A|PF08662.7|0.022,eIF2A|PF08662.7|0.00025,eIF2A|PF08662.7|0.034 R_Transcript_66511:544-2946(+)
MTTKRAYKLQEFVAHTSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCMTFNPDGRTLLSGLHESLKVYSWEPIRCYNTVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDISRIEPYSVRMHSNGHSDSKSTSCGNSSALTENSATVGRLPSSQNSDPVEKETKSAGRVQTSTNSSCANKDSKVSATTVGMPGTPQRVTLSTTPKNTVSVAAVSGTMVQKRNSLRTQSAANACTFNKSDIVPIIVPRNDVKLEQTAEYKREVFSRRTISHPSQSKFTDLRRISNASEESDGSSICVQPEPTSVKASEFVGVPNKSILPAVRNLNISLPVSERNMKDDKCAGSVKVENNSSLQPLASCQYEAYEIRLPKSTKDANSLEFQRSVKTRSLVANWEKKERSPTFEGSASSNAAAIMINVDSSALSMKSKHGYSLSVEKDATSLTDDDVIAEITGRHNQFLSSMQSRLDKLQVVHRLWDRNDIKGAIGAMEKMADRGVVAEVVSFLTEKIDIITLEICTYLLPLLASLLESDMDRHLGISLDMLIKLVRVFGSVIHSAISASSSVGVDIEAEERLERCNLCYIELERVKRCLPALMRRGGAVAKSAQELNLALNATCE*

Click here to download the sequence:
Link to NCBI Protein BLAST