Transcript Information: R_Transcript_66522.p1


Annotated TAIR IDAT5G22790.1
Annotated Gene Namereticulata-related 1
Annotated Gene Symbol(s)RER1
Annotation TypeOrtholog
Chromosome Positionchr5:7599395-7601573 | Reverse length=433
E-Value3E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.104710616792
Replicate 214.301827819797
Replicate 317.705690895577
Condition 2: 8 Hour
Replicate 120.109164449428
Replicate 226.033683689496
Replicate 325.385948186483
Condition 3: 24 Hour
Replicate 124.122333681283
Replicate 223.706739628761
Replicate 324.742622689536


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66522.p1 GENE.R_Transcript_66522~~R_Transcript_66522.p1 ORF type:complete len:414 (+),score=71.93,DUF3411|PF11891.4|5.5e-64,DUF3411|PF11891.4|5.1e+03 R_Transcript_66522:148-1389(+)
ATGGCCGTTTGTTCATCGAGCTTCAACGTTTCAAATCTCCACATCAACATCTCAATCGACACCAATCCTCATCCTCGAACCTCCAATTTCATTCTCAATCGTAGGGTTTCTGTTCACTCTCATTCCATTCCCCCTCCCAAACTAGTACTAACACTAAATTGGTCGTTTTCGAGGAGAGAGAAAGATGCTTTCGTCGTTAAATCCTACAATCCGTCAACTTCGGACGAAATTAGGGTTTTAGAAGAGAGTAGTGCACCAAAACCTGATAATGGAGGTTCTGGTGATGGTAATGAGGGACTTCCACCAGATAATGGTGATAGTGATAGTGGTGGTGGTGGCGGTGATAATGAAGGTGATGATCGTGATGAAAAGGAGTTCGGACCGATTATGAAGCTCGATGATGTTTTAAATGAGACCGAGAAATTTGGAGCAACTCTTCCTTCTGATATTTTGGAGGCTGCCAAGACTACTGGTATCCGGAAACTCATCTTGAGTCGATATTTGGATTTACAGGGATCAATTTGGCCTATAGGGTTTTTGATGAGATATTTTCCGATGTTCCGCAACAGGATGCTTGCAGATCCAACATTCTTATTCAAAGTTGGGACTGAGGTTGTAATTGATTCTTGTTGTGCCACATTTGCAGAAGTTCAAAAAAGGGGGAAAGATTTTTGGAATGAGTTTGAACTGTACATGGCTGATCTTCTGGTCGGAGTGGTTGTTGATGTAGCCTTAGTTGGTATGTTAGCACCGTATGTTCGTATAGGGAAGCAAACTGTATCAAATGGTTTCTTTGGACGTATCCAGCATGCTAGTCGTGACCTTCCTAGCAGTGTCTTTGAAGCTGAAAGACCTGGATGTAGGTTTTCAGCAAGGCAGCGAATCGCAACATATTTCTACAAGGGTCTACTCTATGGGGCAGTTGGATTTGGATGTGGAATAATTGGCCAGGGTATTGCAAATGTGATCATGACTGCCAAACGGAGCATAAAGAATTCAGATGAGGATATACCTGTTCCTCCACTGGTGAAAAGTGCTGCTCTCTGGGGTGTCTTCCTAGGTATTTCGTCCAATACTCGTTATCAGATTATAAATGGACTAGAACGTGTTGTTGAAAGCTCACCATTGGCGAAGAAGGTTCCACCAGTTGCCCTGGCTTTTACCGTTGGTGTGCGATTTGGCAACAATATATACAGTGGCATGCAGTTTGTAGATTGGGCTAGATGGAGCGGTGTTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66522.p1 GENE.R_Transcript_66522~~R_Transcript_66522.p1 ORF type:complete len:414 (+),score=71.93,DUF3411|PF11891.4|5.5e-64,DUF3411|PF11891.4|5.1e+03 R_Transcript_66522:148-1389(+)
MAVCSSSFNVSNLHINISIDTNPHPRTSNFILNRRVSVHSHSIPPPKLVLTLNWSFSRREKDAFVVKSYNPSTSDEIRVLEESSAPKPDNGGSGDGNEGLPPDNGDSDSGGGGGDNEGDDRDEKEFGPIMKLDDVLNETEKFGATLPSDILEAAKTTGIRKLILSRYLDLQGSIWPIGFLMRYFPMFRNRMLADPTFLFKVGTEVVIDSCCATFAEVQKRGKDFWNEFELYMADLLVGVVVDVALVGMLAPYVRIGKQTVSNGFFGRIQHASRDLPSSVFEAERPGCRFSARQRIATYFYKGLLYGAVGFGCGIIGQGIANVIMTAKRSIKNSDEDIPVPPLVKSAALWGVFLGISSNTRYQIINGLERVVESSPLAKKVPPVALAFTVGVRFGNNIYSGMQFVDWARWSGVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST