Transcript Information: R_Transcript_66596.p1


Annotated TAIR IDAT3G22320.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)ATRPABC24.3, RPB5A, NRPB5, NRPD5
Annotation TypeOrtholog
Chromosome Positionchr3:7891045-7892094 | Reverse length=205
E-Value5.6E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 193.557447212351
Replicate 2102.54714841004
Replicate 396.164033676601
Condition 2: 8 Hour
Replicate 183.157309458519
Replicate 294.736682969661
Replicate 392.248765085252
Condition 3: 24 Hour
Replicate 195.602076474787
Replicate 2100.79359860138
Replicate 3100.55655631517


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66596.p1 GENE.R_Transcript_66596~~R_Transcript_66596.p1 ORF type:complete len:207 (+),score=37.32,RNA_pol_Rpb5_C|PF01191.15|4.6e-36,RNA_pol_Rpb5_N|PF03871.10|9e-33 R_Transcript_66596:231-851(+)
ATGGCCACCTCAGATGACGAGATAAATCGACTATATAGAATCCAAAGAACAATTATGCAAATGCTTAATGACAGAAATTACGTTGTAGCAGATCATGAGCTCAACATGACCAAGCAGCAATTCATTAATAAATATGGTGAGTACGCGAAGAGGGATGCCCTTTCTATTCAAAAGGCTAGACGCAATGACAGCTCTGACCAGATATATGTTTTCTTTCCCGACGAGGCCAAGGTTGGTGTTAAGACAATCAAGAATTACGCCAATATTATGAAGAATGAAAATGTCATTCGAGAAATTTTGGTTGTTCAGCAGAACTTGACTCCCTTTGCTAAGACTTGCATCAGCGAGTTATCACCTAAATTCCACTTGGAGGTTTTTCAGGAGGCAGAGCTCTTGGTTAATATTAAGGAGCATGTTCTTGTTCCTGAGCATCAGTTGCTAACAGATGAAGAAAAGAAGACCCTACTGCAGAGGTACACAGTGAAAGAAACACAGCTACCAAGAATTCAGATGACTGATCCTGTTGCAAGGTATTATGGACTTAAACGAGGACAAGTTGTGAAGATTATTAGGCCTAGTGAGACTGCAGGCAGATATGTAACTTATCGATATGTTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66596.p1 GENE.R_Transcript_66596~~R_Transcript_66596.p1 ORF type:complete len:207 (+),score=37.32,RNA_pol_Rpb5_C|PF01191.15|4.6e-36,RNA_pol_Rpb5_N|PF03871.10|9e-33 R_Transcript_66596:231-851(+)
MATSDDEINRLYRIQRTIMQMLNDRNYVVADHELNMTKQQFINKYGEYAKRDALSIQKARRNDSSDQIYVFFPDEAKVGVKTIKNYANIMKNENVIREILVVQQNLTPFAKTCISELSPKFHLEVFQEAELLVNIKEHVLVPEHQLLTDEEKKTLLQRYTVKETQLPRIQMTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV*

Click here to download the sequence:
Link to NCBI Protein BLAST