Transcript Information: R_Transcript_6665.p1


Annotated TAIR IDAT1G64080.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23785230-23786557 | Reverse length=411
E-Value3.7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0029064796473
Replicate 21.6932500335724
Replicate 33.3990642884613
Condition 2: 8 Hour
Replicate 13.4754130892864
Replicate 24.5443082451442
Replicate 33.7474292893702
Condition 3: 24 Hour
Replicate 14.9618486588909
Replicate 22.9169858532699
Replicate 36.1426784121292


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6665.p1 GENE.R_Transcript_6665~~R_Transcript_6665.p1 ORF type:5prime_partial len:310 (+),score=55.13 R_Transcript_6665:3-932(+)
GCTGACGAAGAGGAGAGAGAAACTGATATCACCGACGACGAAGAAGAAAACGACGTCGTAAAAGGTGGTGCATGTGACCGTTCTGACCCTAATTTGTTACCGTTGTCCCCAGCAGACGATGACGCGTTCTTCAAAGGCAGGATTGTCCGAATCGACGGCGAAGAGGAACATGAGGAAACCATTTCTAGTAATAATAACAACAATAAGTCCGGCCAGTTTCCGATCCCGGTGTCGCTTGTCCGGTCAGCTACCAAGTTGCGGGTCTTCATGCTCGGGTTAAAGCGGTCAAAGTCCGAGTCAACAACTACCACCACCATGACAACGACAGCAACAAAATCACCTAGCAAGCTGTTTACGGTCAATTTCAAGGTAGAAGAGGTTCCGATATTCTCCCTCCTGACTCGAGCTTCGTCAAACTCAAAAACTTCAGACCAGGAGATGGCGGCGGGTATGGCGGAGGAGAAGAGGAACAAGAAATTAGAAGTGAAGATGCAGAAGTACTTGAAATTAGTGAAGCCGCTCAAAGTTTCGAAGCGAAACCACCAAGAGACGGCGACGGGTGCGGCGGAGGAGTTGAAGGAAGAGGTGGCGGCGGCGGAGAAGGAGAAGGAGGGGCAAAAGCAGCAAGGGTTGAATTTGAAAGGGATAATGATGGCGAAGAAACATTTGGGGAAAAGTAAATCGGCAGTTGTGCATTCAATGCCGCCAAATGTGGCTTCCAAGAGAAGAGATGACTCGCTTTTACAACAGCAGGATGGCATTCAGAGTGCCATCTTGCATTGCAAGCGCTCCTTCAACTCTTCTCGAGAAGGGGAGGAGCAGTCGCAGGTGTTGTCGCGTTCGGTGAGTGACCCGTCGCATGAGAAGCAGAAAGCGGTGGTAAAGGCTGCGGAGAAGGATGGGAAGAACGACGTCGTTACAGGTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6665.p1 GENE.R_Transcript_6665~~R_Transcript_6665.p1 ORF type:5prime_partial len:310 (+),score=55.13 R_Transcript_6665:3-932(+)
ADEEERETDITDDEEENDVVKGGACDRSDPNLLPLSPADDDAFFKGRIVRIDGEEEHEETISSNNNNNKSGQFPIPVSLVRSATKLRVFMLGLKRSKSESTTTTTMTTTATKSPSKLFTVNFKVEEVPIFSLLTRASSNSKTSDQEMAAGMAEEKRNKKLEVKMQKYLKLVKPLKVSKRNHQETATGAAEELKEEVAAAEKEKEGQKQQGLNLKGIMMAKKHLGKSKSAVVHSMPPNVASKRRDDSLLQQQDGIQSAILHCKRSFNSSREGEEQSQVLSRSVSDPSHEKQKAVVKAAEKDGKNDVVTGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST