Transcript Information: R_Transcript_66714.p1


Annotated TAIR IDAT5G23400.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7880603-7882372 | Forward length=589
E-Value4.4E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.402262284759
Replicate 29.7795789918984
Replicate 311.587214510241
Condition 2: 8 Hour
Replicate 15.2732497131797
Replicate 25.0022673901817
Replicate 36.0606379366901
Condition 3: 24 Hour
Replicate 114.832506506046
Replicate 29.4627738478771
Replicate 314.83540584788


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66714.p1 GENE.R_Transcript_66714~~R_Transcript_66714.p1 ORF type:complete len:599 (+),score=89.07,LRR_8|PF13855.2|0.00012,LRR_8|PF13855.2|3.5e-08,LRR_8|PF13855.2|1.7e-09,LRR_8|PF13855.2|1.3e-06,LRR_8|PF13855.2|6.2e-10,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|4.2e-05,LRR_8|PF13855.2|2.4e-05,LRR_8|PF13855.2|3.7e-06,LRR_8|PF13855.2|5.9e-06,LRR_4|PF12799.3|8.3e+02,LRR_4|PF12799.3|81,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.00055,LRR_4|PF12799.3|0.054,LRR_4|PF12799.3|1.5e+03,LRR_4|PF12799.3|6.7,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.062,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|85,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|90,LRR_1|PF00560.29|6.7e+02,LRR_1|PF00560.29|0.048,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|2.2e+02,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|16,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|1e+03,LRRNT_2|PF08263.8|3.7e-10 R_Transcript_66714:283-2079(+)
ATGCAGAAATTGAGATGGGTTTTGAAGTTCTTGGTGATTCTTGCAGTTTTTTGTCAGTTATCAGCATCTGTTTCTGATGCTGCTTGTTCACCAGCTGATAGAGCTGCACTTCTGAGCTTCAAAGCCAAGATCATCAAGGATACAACAGGTACACTTTCCTCTTGGGTTGGTACTGATTGTTGTGGAGGTGATTGGGAAGGTGTACAGTGCAACTTAGCCACTGGGAGAGTCACTTCTCTTGTGCTTCAGAAACTTTCCTCGGACGATGGAGATGCTGCGCCTGATGACCTGTATATGGAGGGCACTCTCTCCCCTGCTTTGGGCAACTTGCAGTTCCTCGAAACTCTGGTCATCAGTGGGATGAAGCATCTCAGGGGCGCCATTCCCGAGAGCCTCTCGAGGTTGGCACACCTTTCACAGCTTGTCCTTGAGGGTAACTCTTTAATGGGAGCTATCCCTTCGAGCCTTGGTCGTCTGCCTTTACTCAACACCCTCATATTGGATGGCAATCGATTGAAGGGTCCAATTCCGCCTTCCTTGGGAAACCTCAAGGGACTGCAACAGCTTAATTTAGGCAAAAATTACCTGGTTGGTTCTATCCCAGCTACCTTCAGAAATCTTCAGAGCTTGCAGTTGCTTGATCTTAGCTCTAATTTAGTTTCTGGCTTGATCCCTGATTTCGTTGGACAGTTTCACAACCTCACTTTCCTTGATCTTTCTAATAACCAGCTCACTGGTCCCATGCCCATCGCACTTTGTAGCCTTGCCGCGCTCTCTGACATTTCCCTGAGCAACAACCAGCTCACAGGAAGGATTCCTGAGCAAATTAGTGGCCTTAAAGCCCTCACCAGCCTTTCGCTTAGCAATAACCGTTTTACAGGTCAAATTCCTGAATCACTTGCTACATTACACAGCTTATGGTACCTCAATTTGTCTCAAAATGCACTCTCGAATCCCTTGCCAAATACCCTTGTCAAAGGTTTGCCTTCTCTTTTGTCAATTGACTTGTCCTACAACAAATTCAGCTTGGAGACGGTTCCTGATTGGATCAGGAGTCGCGAGCTCTCAGCTGTCCATTTAGCCGGTTGCAACCTCAGAGGAATACTTCCAATCTTCACGAGGCCTGCCTCCTTGACCTCCTTGGACCTGTCTAATAACCATTTCACAGGCGGTATCTCGAATTTCTTCATAAGGATGTCCAACCTGCAGTTTCTCAAGCTGTCCAACAACCAACTCAAGTACGACATTTCAAAGATTGCATTGCCAAAAGGGATTTCTTCTATCGACCTCAGTTCAAATCAGCTCTTTGGCCCCATTGCAGGGATCTTCAACAGCCATACAAGCAGCTTTTTAGAGATTGTTGACGTCTCAAAGAACATGATCTCCGGCACAATTCCTGAGTTTCCAGAGGGACTGAGCTTGAAAGTACTCAACATAGGAAGCAACAAGATCACAGGACAAATACCAAGATCAGTCTCCAGTCTGGTCGAGCTCCAAAGATTCGATATAAGTAGAAATCAGATTACAGGAACAATACCAGCAAATCTAGGCCTGTTGGTTAAGCTAGAATGGCTAGACTTGTCGATTAACAGCCTCACAGGAATAATCCCCGAAAGCTTGCTCAAGATACCCAATCTCAAGCACGTCAGTTTTCGGGCAAACAGATTGTGTGGGCAGATACCACAGGGCAGGCCCTTCAACATCTTTCCTGCAGTTGCTTATGCACACAACAAATGTTTGTGTGGCAAACCCCTGACACCTTGTCAGGGGAAGAGACCACCAAATATGGGCCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66714.p1 GENE.R_Transcript_66714~~R_Transcript_66714.p1 ORF type:complete len:599 (+),score=89.07,LRR_8|PF13855.2|0.00012,LRR_8|PF13855.2|3.5e-08,LRR_8|PF13855.2|1.7e-09,LRR_8|PF13855.2|1.3e-06,LRR_8|PF13855.2|6.2e-10,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|4.2e-05,LRR_8|PF13855.2|2.4e-05,LRR_8|PF13855.2|3.7e-06,LRR_8|PF13855.2|5.9e-06,LRR_4|PF12799.3|8.3e+02,LRR_4|PF12799.3|81,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.0045,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.00055,LRR_4|PF12799.3|0.054,LRR_4|PF12799.3|1.5e+03,LRR_4|PF12799.3|6.7,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.062,LRR_1|PF00560.29|2.1e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|85,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|90,LRR_1|PF00560.29|6.7e+02,LRR_1|PF00560.29|0.048,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|2.2e+02,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|16,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|1e+03,LRRNT_2|PF08263.8|3.7e-10 R_Transcript_66714:283-2079(+)
MQKLRWVLKFLVILAVFCQLSASVSDAACSPADRAALLSFKAKIIKDTTGTLSSWVGTDCCGGDWEGVQCNLATGRVTSLVLQKLSSDDGDAAPDDLYMEGTLSPALGNLQFLETLVISGMKHLRGAIPESLSRLAHLSQLVLEGNSLMGAIPSSLGRLPLLNTLILDGNRLKGPIPPSLGNLKGLQQLNLGKNYLVGSIPATFRNLQSLQLLDLSSNLVSGLIPDFVGQFHNLTFLDLSNNQLTGPMPIALCSLAALSDISLSNNQLTGRIPEQISGLKALTSLSLSNNRFTGQIPESLATLHSLWYLNLSQNALSNPLPNTLVKGLPSLLSIDLSYNKFSLETVPDWIRSRELSAVHLAGCNLRGILPIFTRPASLTSLDLSNNHFTGGISNFFIRMSNLQFLKLSNNQLKYDISKIALPKGISSIDLSSNQLFGPIAGIFNSHTSSFLEIVDVSKNMISGTIPEFPEGLSLKVLNIGSNKITGQIPRSVSSLVELQRFDISRNQITGTIPANLGLLVKLEWLDLSINSLTGIIPESLLKIPNLKHVSFRANRLCGQIPQGRPFNIFPAVAYAHNKCLCGKPLTPCQGKRPPNMGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST