Transcript Information: R_Transcript_66758.p1


Annotated TAIR IDAT1G09880.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3208828-3211653 | Reverse length=631
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1119.25898323264
Replicate 280.721528025353
Replicate 3100.29115683289
Condition 2: 8 Hour
Replicate 173.076985542038
Replicate 2100.79775752244
Replicate 383.045969833169
Condition 3: 24 Hour
Replicate 182.909801231657
Replicate 270.96536668937
Replicate 396.963665840918


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66758.p1 GENE.R_Transcript_66758~~R_Transcript_66758.p1 ORF type:complete len:193 (+),score=22.97,CBM-like|PF14683.2|6.4e-10 R_Transcript_66758:671-1249(+)
ATGATGTTCTTTTCTGATGATTATTTAGGCGGCCAAATGTATATGGAGTTCGATTTGGAAGAGCAATGGAAGAAAGTATTTGGACCATATTTTGTTCATTTGAACACTGCTGAAGATCCCACTACCGCATGGGAGAAAGCAAAAAATCAGTTGTCTGAAGAAATTCAGAAATGGCCTTATGTCTTTGATCCCAAGTTTACTCAGACAACAACAATTAAGGGGCGATTGTTCATTAAAGATAGGTATCTAAGCCAAACCCCATTTCCAGCACGCTTTGCTTGGGTTGGTTTATACAAAGGGTATAACCGCGCCGAGTGGGAAATAGAAGGCAAGTTGAGGATTAATGACCCAGACATTAGACACATGCCGTACCTCTCTACTGGGATATCATGGGAGGATAAAGCCTTCCTAAGGGTCGGAATTCACGGGGCTTACAATGTTTATACTATTCCCATAATCAGTGAAAGGCTGAATACTGGTAACAATTCCTTCTACCTCACCCAAGCAATAACTGAGAATCCTTTCTGTGGAGTGTTGTATGACTACCTGCGTCTTGAAGGTCCCCAACCCATTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66758.p1 GENE.R_Transcript_66758~~R_Transcript_66758.p1 ORF type:complete len:193 (+),score=22.97,CBM-like|PF14683.2|6.4e-10 R_Transcript_66758:671-1249(+)
MMFFSDDYLGGQMYMEFDLEEQWKKVFGPYFVHLNTAEDPTTAWEKAKNQLSEEIQKWPYVFDPKFTQTTTIKGRLFIKDRYLSQTPFPARFAWVGLYKGYNRAEWEIEGKLRINDPDIRHMPYLSTGISWEDKAFLRVGIHGAYNVYTIPIISERLNTGNNSFYLTQAITENPFCGVLYDYLRLEGPQPIG*

Click here to download the sequence:
Link to NCBI Protein BLAST