Transcript Information: R_Transcript_6677.p1


Annotated TAIR IDAT1G60900.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22424008-22427806 | Forward length=589
E-Value8E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.200184062931
Replicate 24.4911872548231
Replicate 35.2673246878853
Condition 2: 8 Hour
Replicate 17.8564272558006
Replicate 26.6963068615315
Replicate 311.987828404373
Condition 3: 24 Hour
Replicate 110.496751432988
Replicate 24.1869609123823
Replicate 37.6080256933066


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6677.p1 GENE.R_Transcript_6677~~R_Transcript_6677.p1 ORF type:complete len:374 (+),score=95.43,RRM_1|PF00076.18|0.027,RRM_1|PF00076.18|0.0018,RRM_1|PF00076.18|1.3e-17,RRM_6|PF14259.2|5.1e-06,RRM_6|PF14259.2|0.0026,RRM_5|PF13893.2|0.0074,RRM_5|PF13893.2|0.82,RRM_7|PF16367.1|1.1,RRM_7|PF16367.1|0.0073 R_Transcript_6677:95-1216(+)
ATGTCTGATTACGATCGTGCTAAGTCCTCTCCTCGAAGAGGCTCGGATGATCGAAGCTCCCGTCATAAGCATAGGTCAAGGGATCTTGACCATGAGGTGTCAAGAGACTCAAGAACTAGAGAACGGGAGCATCACCGTGAGCAGGACTGGAGAAAGGATCGAGATCATCATCATAGGGATTACAGGGATAGAAATTCTAGGGATGATAGAAGAAGAGATTACGGAAGCCGTGACTATGACAGGTCACGTGATAGAGAAAGGAGGCACAGAGATAAATCACGCTCTCGTTCACCTTCCAATTCAAAAAGCAAGCGAACAAGTGGTTTTGACATGGCACCGCCAGCAGCTCCATTGCTCCAAAATGCCCCAGCACCAGATCAACTTCCAGGGCTGCCTCAATCAATGCCAGGGCTATTGCAGAACATGTTCCCTGGAGGGCCAGCTCAGTTGGGGCCTCTCTCTTTGATGCCAGCACACACTATGACTCAACAGGCTACCAGGCATGCTCGTCGAGTCTATGTTGGTGGGCTTCCTCCTTCAGCCAATGAGCAGACAATTGCAACCTTCTTTAGCCAAGTTATGACTGCAGTTGGTGGAAACTCCGCTGGACCAGGAGATTCGGTTGTCAATGTGTATATCAATCATGAAAAGAAGTTTGCCTTTGTAGAAATGAGATCTGTTGAAGAAGCAAGTAATGCTATGGCATTGGATGGCATTTCATTTGAGGGGGTTTCTGTAAGGGTGAAGAGACCTACCGATTATAATCCTGCATTAGCTGCAGCTCTTGGTCCAAGCCTCCCAAGTCCTCACCTAAACCTGGCTGCTGTTGGCCTTGTGCCAGGAGCTGTTGCTGGGGCAGAGGGACCTGATCGTATATTTGTTGGGGGAATACCGTACTATTTCACTGAAGAGCAGATGAGAGAGTTGCTGGAATCATTTGGGCCGTTGAAAGGGTTTGACCTTGTGAAGGATAGAGACACTGGCAATTCAAAAGGCTATGGTTTTTGTGTTTACCAGGACCCAGCAGTGACTGATGTGGCCTGTGATGCACTTAATGGTTTGAAAATGGGAGATAAAACTTTAACTGTACGGAGAGCTGCTGTCAGGTTTGTTTTCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6677.p1 GENE.R_Transcript_6677~~R_Transcript_6677.p1 ORF type:complete len:374 (+),score=95.43,RRM_1|PF00076.18|0.027,RRM_1|PF00076.18|0.0018,RRM_1|PF00076.18|1.3e-17,RRM_6|PF14259.2|5.1e-06,RRM_6|PF14259.2|0.0026,RRM_5|PF13893.2|0.0074,RRM_5|PF13893.2|0.82,RRM_7|PF16367.1|1.1,RRM_7|PF16367.1|0.0073 R_Transcript_6677:95-1216(+)
MSDYDRAKSSPRRGSDDRSSRHKHRSRDLDHEVSRDSRTREREHHREQDWRKDRDHHHRDYRDRNSRDDRRRDYGSRDYDRSRDRERRHRDKSRSRSPSNSKSKRTSGFDMAPPAAPLLQNAPAPDQLPGLPQSMPGLLQNMFPGGPAQLGPLSLMPAHTMTQQATRHARRVYVGGLPPSANEQTIATFFSQVMTAVGGNSAGPGDSVVNVYINHEKKFAFVEMRSVEEASNAMALDGISFEGVSVRVKRPTDYNPALAAALGPSLPSPHLNLAAVGLVPGAVAGAEGPDRIFVGGIPYYFTEEQMRELLESFGPLKGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACDALNGLKMGDKTLTVRRAAVRFVFL*

Click here to download the sequence:
Link to NCBI Protein BLAST