Transcript Information: R_Transcript_6679.p1


Annotated TAIR IDAT1G60900.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22424008-22427806 | Forward length=589
E-Value1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7841240030928
Replicate 22.1312034257145
Replicate 31.8945422072006
Condition 2: 8 Hour
Replicate 13.4979807067493
Replicate 22.3537770359143
Replicate 38.3251747958166
Condition 3: 24 Hour
Replicate 13.0207641089084
Replicate 25.9698445117352
Replicate 37.0764759514029


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6679.p1 GENE.R_Transcript_6679~~R_Transcript_6679.p1 ORF type:complete len:266 (+),score=59.39,RRM_1|PF00076.18|0.018,RRM_1|PF00076.18|0.0032,RRM_6|PF14259.2|5.1e-06 R_Transcript_6679:110-907(+)
ATGTCTGATTACGATCGTGCTAAGTCCTCTCCTCGAAGAGGCTCGGATGATCGAAGCTCCCGTCATAAGCATAGGTCAAGGGATCTTGACCATGAGGTGTCAAGAGACTCAAGAACTAGAGAACGGGAGCATCACCGTGAGCAGGACTGGAGAAAGGATCGAGATCATCATCATAGGGATTACAGGGATAGAAATTCTAGGGATGATAGAAGAAGAGATTACGGAAGCCGTGACTATGACAGGTCACGTGATAGAGAAAGGAGGCACAGAGATAAATCACGCTCTCGTTCACCTTCCAATTCAAAAAGCAAGCGAACAAGTGGTTTTGACATGGCACCGCCAGCAGCTCCATTGCTCCAAAATGCCCCAGCACCAGATCAACTTCCAGGGCTGCCTCAATCAATGCCAGGGCTATTGCAGAACATGTTCCCTGGAGGGCCAGCTCAGTTGGGGCCTCTCTCTTTGATGCCAGCACACACTATGACTCAACAGGCTACCAGGCATGCTCGTCGAGTCTATGTTGGTGGGCTTCCTCCTTCAGCCAATGAGCAGACAATTGCAACCTTCTTTAGCCAAGTTATGACTGCAGTTGGTGGAAACTCCGCTGGACCAGGAGATTCGGTTGTCAATGTGTATATCAATCATGAAAAGAAGTTTGCCTTTGTAGAAATGAGATCTGTTGAAGAAGCAAGTAATGCTATGGCATTGGATGGCATTTCATTTGAGGCATGCTCCTCTTATTGCTCTCTCCCCTCCTTACCTCCCCTAGCACAACTGAGCATGGATGTTTATATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6679.p1 GENE.R_Transcript_6679~~R_Transcript_6679.p1 ORF type:complete len:266 (+),score=59.39,RRM_1|PF00076.18|0.018,RRM_1|PF00076.18|0.0032,RRM_6|PF14259.2|5.1e-06 R_Transcript_6679:110-907(+)
MSDYDRAKSSPRRGSDDRSSRHKHRSRDLDHEVSRDSRTREREHHREQDWRKDRDHHHRDYRDRNSRDDRRRDYGSRDYDRSRDRERRHRDKSRSRSPSNSKSKRTSGFDMAPPAAPLLQNAPAPDQLPGLPQSMPGLLQNMFPGGPAQLGPLSLMPAHTMTQQATRHARRVYVGGLPPSANEQTIATFFSQVMTAVGGNSAGPGDSVVNVYINHEKKFAFVEMRSVEEASNAMALDGISFEACSSYCSLPSLPPLAQLSMDVYI*

Click here to download the sequence:
Link to NCBI Protein BLAST