Transcript Information: R_Transcript_66884.p1


Annotated TAIR IDAT5G53430.1
Annotated Gene NameSET domain group 29
Annotated Gene Symbol(s)SDG29, SET29, ATX5
Annotation TypeOrtholog
Chromosome Positionchr5:21677623-21683166 | Forward length=1043
E-Value7.3e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8749731108636
Replicate 23.6024109343699
Replicate 34.6278586615577
Condition 2: 8 Hour
Replicate 13.7288119209003
Replicate 25.017010037464
Replicate 38.071477615969
Condition 3: 24 Hour
Replicate 16.7591513665322
Replicate 25.2171323060959
Replicate 36.5329798760891


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66884.p1 GENE.R_Transcript_66884~~R_Transcript_66884.p1 ORF type:3prime_partial len:985 (+),score=204.24,zf-HC5HC2H_2|PF13832.2|4.7,zf-HC5HC2H_2|PF13832.2|12,zf-HC5HC2H_2|PF13832.2|1.4e-27,PWWP|PF00855.13|1.1e+04,PWWP|PF00855.13|8.3e+03,PWWP|PF00855.13|5.9e-16,zf-HC5HC2H|PF13771.2|47,zf-HC5HC2H|PF13771.2|29,zf-HC5HC2H|PF13771.2|3.8e+03,zf-HC5HC2H|PF13771.2|2.3e-15,PHD|PF00628.25|1.3e+02,PHD|PF00628.25|1.1e-08,PHD|PF00628.25|7.9e+03,PHD|PF00628.25|2.7e-06,PHD|PF00628.25|5e+03,PHD|PF00628.25|6.2e+02,PHD_2|PF13831.2|1.2e+03,PHD_2|PF13831.2|0.036,PHD_2|PF13831.2|1.4e-11,PHD_2|PF13831.2|1.6e+04 R_Transcript_66884:503-3454(+)
ATGATTATCAAACGCGAGTTGAAATCGACAATGCCCACCCTTAAACGGTGTCGTATCAGCCAATCTTCAGGAGAGGAAGAGGATAACAATCTAGCTTCCACCACCACCACCAATAACAATAATATCCACCGTATTAGTAAAAGGCCTAAACGAACTAACAACAACGGCACTTATTTCCCCTTGAGTTTGCTAGGTGAAGTTGCTGCTGGTGTAATTCCTTTCAATGGCTATGGTTTCCACCGCTTGTTGAGCGCCAACAATGGCGGCAGTGGCAGTGGGGCTAGTGCTGGTGGTAGTGGTAATGGTAATGGCGGCTGTTCCGATGATTTTAGGAGCTTCTCTGCTTCCTGGTGCACCGAGGTGTCGTGCTCCCCCAGCGAGGTCGAGGAGACCGATTCCAAGAGGAGAGAGAAAGGTGGTGGTGGTTCCGAGAAGACGCGGCCGGTGGCTTCCGTTGCTGATGAGAGTCCGAGGCCGCCCTTGGTTCGGACCTCCAGGGGCCGTGCTCAGGTATTGCCTTCTAGATTCAAGGATTCTATTTTAGATGATTGGAAGAAGGACAAGACTACTACTAGTAGTAAAACCAATAATGTTAGTGTTAGAGACTTTGATTGTGGTTATAATGATGATAATAATAATCATGTTGTTGTTAGTGGAAAAAGGAATGAGAAATTTAGTAGTTGTAAAGGTCAGAGATTTGAATTTGGTGGTGGTAGTAAATACAGAGGCAATAATGTGCATAAATTCGATGATGGAACTTATGGGGCTACGTCCTCTGATTACGAGGAGGAAGATGAGTATGATAATGATGGTGGTGATGATGAGGGGGATGAGGATGATGATGAGGATTATGAATATGGTTTGGATTGGAGAGACAGGAAAAACCATGGATTGAAGCGGTATCCGAGTTCTTTTAGTGCATTGACTGCGTTGCGTGAGAGGCATTGGACGGAACAGCAGAAGCCTGCGGTTTATTTGAATGGAGCTCGTCGTGGGGGTGGTTTGAAGGAGAATTATAATGTTAGAGTGAATGGTTCATGTAATATGGACCGATTTTTTCCTGGTGATATAGTGTGGGCCAAGTCAGGGAAGAATGATCCAGCGTGGCCAGCTATTGTTGTTAATCCTGCTTCTCAAGCTCCACGGAAGGTTTGGGAATATCATGTGCCTAATGCGGTTTGCGTGATGTTCTTTGGGTACTCTGGAAATGGAAAAAGGGACTATGCGTGGGTAAAACCTGAAAGGATTTATCCATTTGCGGATAATGTGGACAGGTTCCAGGAGCAGGAGTGTTTGAATGGCTGTGTGCTCACCATCTTCCACAAGGCAATAGAAGAGGCTTTCTTAGCAGAGAATGGATTTACTGAAACATTGATGAAGGAGTTAAATATGGCTGCTGGCAATTCTTTTTATATGGATTCCATGCCTAGAGGAATACAGGAGGCTACTGGTTCAAACCATTACCAGGATCGTTACTATCACAGCCAGAATGGCCTGAAGAAAGCAAAGGACATACAGCTATGTGAAGGATGTGGAGCTGGCCTTCCTCTCAAGATGAAGAAGAATGGAAATGCTTCAACTTCTGACAGCCACTTCTATTGTACAACTTGTGCTAAGTCACTGAGACTTAAACAATACTGTGGTATTTGCAAAAAGACTGGAAAGCATTCTGACAGCGGGAAATGGGTGCGATGTGATGGTTGTAAAGTTTGGGTACATGCTGAATGTGACAAAATTTCAAGCAATCTTTTTAAGGATCTTGGAGCTACAGACTACTATTGCCCGGATTGCAAAGTAAAGTTCAACTTTGAACTGTCAGATTCAGAGAATTGCCAACCCAAACTTCAGTGCAAGAAAAGAAATGATCAGTTTAAGCTTCCAGATAAGGTTGATGTTGTCTGCTCAGGCATGGAAGGCATATATTTCCCAAGCCTCCATTTAGTTGTTTGCAAGTGTGAATTCTGTGGGACGGAAAAGCAGCAACTGAGTGACTGGGAAAGACATACAGGTTCTAAAGTGAAGAACTGGAAGAAGAGTATTAGGGTCAAAGGTTCTATGCTGACCTTGGAGCAATGGATGCTACAGATGGCAGAGTTTCATGCACAGGCTGCTGCTTCAGCTAAGCCTCCTAAAAAGCCTTCAATGAAAGTACGAAAACAGAAATTGCTTTCTTTCTTGCAAGAGAAGTATCAACCCGTGTATGCGAAGTGGACAACAGAAAGATGTGCTGTGTGTAGATGGGTTGAGGATTATGATTACAACAAAATTATTATCTGCAATAGATGTCAAATCGCTGTTCATCAAGAATGCTATGGAGCTAGAAATGTTCGAGATCTTACTTCGTGGGTATGCAGAGTGTGTGAAACACCAGATATTGAGCGTGAGTGTTGCCTTTGTCCTGTGAAAGGAGGTGCTTTGAAGCCAACTGATGTTGACACACTATGGGTTCATGTGACCTGTGCATGGTTTAGGCCTGAAGTTTCTTTTGCAAGTGATGAGACAATGGAGCCTGCAATGGGAATTCTTAGCATTCCATCAAGTACTTTTGTAAAGGTTTGTATAATATGTAAGCAAATACATGGTGCCTGCACTCAGTGTTGCAAGTGTTCAACTTATTACCATGCCATGTGTGCATCAAGGGCTGGATATCGTATGGAGCTGCATTGCTCGGAAAAGAGTGGGAAACAGATGACCAAGATGGTGTCATATTGTGCTTATCACAGGGCTCCCAACCCCGACACTGTTTTGATAATGCAGACTCCATCAGGGGTCTTCTCTGCCAGAAATTTACTTCAGAACAGGAAACGGACTGGTTCCAGGCTAATTTCATCTAAAATGGCAAGTCACGATGATGATTCAATAGTAGAGCCCTGTGAAACTGAGCCCTGCTCTGCAGCAAGGTGTCGAGTATACCACCAACCCAAAAATAAGAACTGTAAGAGGTCAGGAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66884.p1 GENE.R_Transcript_66884~~R_Transcript_66884.p1 ORF type:3prime_partial len:985 (+),score=204.24,zf-HC5HC2H_2|PF13832.2|4.7,zf-HC5HC2H_2|PF13832.2|12,zf-HC5HC2H_2|PF13832.2|1.4e-27,PWWP|PF00855.13|1.1e+04,PWWP|PF00855.13|8.3e+03,PWWP|PF00855.13|5.9e-16,zf-HC5HC2H|PF13771.2|47,zf-HC5HC2H|PF13771.2|29,zf-HC5HC2H|PF13771.2|3.8e+03,zf-HC5HC2H|PF13771.2|2.3e-15,PHD|PF00628.25|1.3e+02,PHD|PF00628.25|1.1e-08,PHD|PF00628.25|7.9e+03,PHD|PF00628.25|2.7e-06,PHD|PF00628.25|5e+03,PHD|PF00628.25|6.2e+02,PHD_2|PF13831.2|1.2e+03,PHD_2|PF13831.2|0.036,PHD_2|PF13831.2|1.4e-11,PHD_2|PF13831.2|1.6e+04 R_Transcript_66884:503-3454(+)
MIIKRELKSTMPTLKRCRISQSSGEEEDNNLASTTTTNNNNIHRISKRPKRTNNNGTYFPLSLLGEVAAGVIPFNGYGFHRLLSANNGGSGSGASAGGSGNGNGGCSDDFRSFSASWCTEVSCSPSEVEETDSKRREKGGGGSEKTRPVASVADESPRPPLVRTSRGRAQVLPSRFKDSILDDWKKDKTTTSSKTNNVSVRDFDCGYNDDNNNHVVVSGKRNEKFSSCKGQRFEFGGGSKYRGNNVHKFDDGTYGATSSDYEEEDEYDNDGGDDEGDEDDDEDYEYGLDWRDRKNHGLKRYPSSFSALTALRERHWTEQQKPAVYLNGARRGGGLKENYNVRVNGSCNMDRFFPGDIVWAKSGKNDPAWPAIVVNPASQAPRKVWEYHVPNAVCVMFFGYSGNGKRDYAWVKPERIYPFADNVDRFQEQECLNGCVLTIFHKAIEEAFLAENGFTETLMKELNMAAGNSFYMDSMPRGIQEATGSNHYQDRYYHSQNGLKKAKDIQLCEGCGAGLPLKMKKNGNASTSDSHFYCTTCAKSLRLKQYCGICKKTGKHSDSGKWVRCDGCKVWVHAECDKISSNLFKDLGATDYYCPDCKVKFNFELSDSENCQPKLQCKKRNDQFKLPDKVDVVCSGMEGIYFPSLHLVVCKCEFCGTEKQQLSDWERHTGSKVKNWKKSIRVKGSMLTLEQWMLQMAEFHAQAAASAKPPKKPSMKVRKQKLLSFLQEKYQPVYAKWTTERCAVCRWVEDYDYNKIIICNRCQIAVHQECYGARNVRDLTSWVCRVCETPDIERECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDETMEPAMGILSIPSSTFVKVCIICKQIHGACTQCCKCSTYYHAMCASRAGYRMELHCSEKSGKQMTKMVSYCAYHRAPNPDTVLIMQTPSGVFSARNLLQNRKRTGSRLISSKMASHDDDSIVEPCETEPCSAARCRVYHQPKNKNCKRSGE

Click here to download the sequence:
Link to NCBI Protein BLAST