Transcript Information: R_Transcript_66888.p1


Annotated TAIR IDAT5G53430.1
Annotated Gene NameSET domain group 29
Annotated Gene Symbol(s)SDG29, SET29, ATX5
Annotation TypeOrtholog
Chromosome Positionchr5:21677623-21683166 | Forward length=1043
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.180341252476
Replicate 28.1158776609152
Replicate 311.475394507303
Condition 2: 8 Hour
Replicate 17.6282886951033
Replicate 27.9768145798845
Replicate 310.280094860969
Condition 3: 24 Hour
Replicate 112.141148053113
Replicate 29.712796703735
Replicate 311.427907350947


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66888.p1 GENE.R_Transcript_66888~~R_Transcript_66888.p1 ORF type:complete len:1040 (+),score=167.70,zf-HC5HC2H_2|PF13832.2|1.5e+02,zf-HC5HC2H_2|PF13832.2|6.3,zf-HC5HC2H_2|PF13832.2|1.4e-26,SET|PF00856.24|9.5e-17,PWWP|PF00855.13|1e-15,zf-HC5HC2H|PF13771.2|24,zf-HC5HC2H|PF13771.2|21,zf-HC5HC2H|PF13771.2|2.6e+03,zf-HC5HC2H|PF13771.2|3.1e-13,PHD|PF00628.25|3.6e+03,PHD|PF00628.25|9.8e+03,PHD|PF00628.25|5e-09,PHD|PF00628.25|9.4e-07,PHD|PF00628.25|5.3e+03,PHD|PF00628.25|1.2e+02,PHD_2|PF13831.2|0.51,PHD_2|PF13831.2|1.6e+04,PHD_2|PF13831.2|9e-13,PHD_2|PF13831.2|1.4e+04 R_Transcript_66888:680-3799(+)
ATGATTGTAAAACGACAATCTAAACTGGAAATGCCGAATCGAAAACGATGTGATATGAACGATTCAGGTCTCGATGAAGATGATGGTGATTATAGAGATTCGTTTCACCCTAAGAAGCGAAGAACTGCCCCAATTTATGTTGATAATTTAGGGCACTTTGATAATGAAGAAACTGAAGGCTCCTCATTTGGGGAAGATACTGAGTCTGATTCAATGAATAAATCTGCTGTGAACTCCCGAAGAACCTCCAGAGGTCGAGTTCCGGTACTTCCTTCTCGGTTCAATGATTCACTTGTTGGTTCTTGGAAGGACAATAAGTCAAAATTCGCTGACATTGAGTCAGGTTTGCACGAAATTTACTTGAAAAGACGAGATAGTAATAGTAATAACAACATTAACAACAATAATAAGAGGAGTAATAGGCGTGATAGGAGTAGTTTTGGTTTTGATACATATTTAGTCAAGAAAGAGTTTAAAGAGGAGAAATTGAGCTTGCCTAGTTACAGGTATCATCCTTATTGCCAAGATATTATTGAGGAGGATGGGATGGGTTCTTTTGGGGTTAATGATTGCTTTTTGTATAGCAATAGTAATAGTAGTAAATGTTCAGTTAACCGGTGGAATTCGACTCCATTGGTTGAGAATAACGAGTTTATGCCCATGCCTTCTCATGAGAAGGGCACAACAAGGGCCAAACAGAAGAAAGCAGTGTATGGACCGGAGGACTTTGCTTTAGGTGATATAGTTTGGGCAAAGTCAGGGAAAAGGTATCCTGCTTGGCCTGCCATTGTGATTGATCCTATGCTACAAGCCCCCGAGACAGTTTTGAGTTCGTGTATACCGGGTGCTATTTGTGTTATGTACTTTGGTTACTCGAAGAACGGGAAGCAAAGGGATTATTCATGGGTTAAGCGTGGAATGATATTTCCTTTTCTCGACTATCTTGACCGATTCCAAGGGCAGACTGATTTGCACAAGAGCAAGCCAAGCGACTTCAGAATGGCCATTGAGGAGGCCATTCTGGCAGAGCAAGGTTTTACAGATGCTCATTTGGGAATGGTGAAAGAAACCCCATATGACACCAACAGCTTTTATGACGAAATTGGTTCCACCCATGTTCAAGAATGCTTTTCTCAAGATCAGGGTGTGTATGAGAAGAAGAGGGATACACGACCTTGTAGCGGTTGTGGCTTGGTTCTTTCGTGCAAAGCCTTTGTGGCACATGAAGGCCGGCTGTTGTGTAAACATTGTGTCAAGTTATTGAAGTCAAAGCAGTATTGTGGTGTATGTAAGAAAATTTGGCATCATTCTGATGGAGGAAGCTGGGTATGTTGCGATGGTTGTGATGTTTGGGTGCATGCAGAGTGTGCTGATATCTCTGGCAAACATTTTAAGGATTTGGAGGATGCTGAGTATTACTGTCCTGGTTGCAAGCCAAAGTTTGCGTTTGAGCCAATAAATTCAATGATTTCACCAGTAGTCAAGGCCACAACGCTCCCTGATGCAATTACTGTTGTGTGCAATGGCGTGGAAGCAACTTATCTCCCAAGCGTTCACTTGGTTGTTTGTATGTGTGGTAGATGTGGCATAAAGAAGCTGAAACTTAGTGAATGGGAAAAGCACACAGGGTGTAGAGCCAAGAAATGGAAGTATAGTGTCAAAGTCAAGGGGTCAACAATCACTTTGCATCAATGGCTTACTGATTTTGGTGCGAATGGTGTAGATGCCCATACTTGGGATCAGTCAAAGTTATTTGACCTGTTACAAGAAAAATATGAACCAATAATTCCAAAGTGGACAACAGAACGCTGTGCCATATGCAGGTGGATAGAAGATTGGGACTATAACAAAATTATAATATGCAACAGGTGTCAAATAGCTGTTCATCAAGAATGCTACGGAGCTAGAAAAGTTCAAGATTTCACATCTTGGGTTTGCAGAGCTTGTGAAATTCCAGACATGAAGAGGGAGTGTTGCCTTTGTCCTGTTAAAGGTGGTGCTTTGAAGCCAACTGATGTTGATACGTTATGGGTTCACATCACATGTGCTTGGTTTCAACCAGAACTTGCATTCTTAGATCATGAGAAAATGGAACCCGCCATGGGGATCATGAGAATTCCTTCAAACTCATTTGTGAAGAGATGTATAATATGTAAGCAGATTCATGGCTCCTGCATTCGGTGCTGCAAATGTGCTACCTACTATCATGCAATGTGTGCAGCAAGGGCAGGATACTGCCTGGAGCTACAATGCTTGGAAGAGAACGGGAAACAAATAACAAGAAAGGTCTCTTACTGTGCCATTCATAGAAACCCAAATCCGGATGCCGTGCTCATTATACAGACATCAGAAGGGGCTTTCTTCTCTACAAAATTTTTGCTCCAAGACCAAAGGGAAGCAAAAACTGCCAAAGGTTTGACCAGGCTTATTTCTAAAGGAATCGAACTTCCTGATCCCTTGCCATCAACACCTGATGACTTTGATCCCCTATCTGCTGCAAGGTGCAGAATATACATCAGATCTAAGCATAAGAAATCAGTGGCAGAACCTATATTCCATCGGTTGATGGGGCCAATGCATCATTCCATCCAGGAGATTGATAGCATGAATTTGTTCGAAGAGGTTGATCACCGAAAGCAGTTTTCCACATTGAAGGAGCGTCTTCATCAGTTGCAGATTACGGAGAAGCAGCGGGTTTGTTTTGGCAAGTCTGGAATACATGGATGGGGTCTCTTTGCACGTCGAAATATTCAAGAAGGAGAAATGGTGCTTGAGTATCGTGGAGAGCAAGTGAGGCGCAGTGTTGCAGACTTAAGGGAGGCAAAATATCGCCTAGAAGGAAAGGATTGCTATTTGTTTAAGATCAGTGATGATGTAGTAATTGATGCTACCGACAAGGGAAACATAGCTCGACTAATCAACCACTCTTGTATGCCAAACTGCTATGCTAGGATCATGAGCGTGAGTGATGCAGAAAGCCGGATAGTACTCATTGCCAAGACTAACGTGTCTGCTGGTGATGAGCTCACTTATGATTACTTGTTTGATCCTGATGAACGTGATGACTCAAAAGTCCCTTGCCTCTGCGGAGCTCCCAACTGTCGCAAATTTATGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66888.p1 GENE.R_Transcript_66888~~R_Transcript_66888.p1 ORF type:complete len:1040 (+),score=167.70,zf-HC5HC2H_2|PF13832.2|1.5e+02,zf-HC5HC2H_2|PF13832.2|6.3,zf-HC5HC2H_2|PF13832.2|1.4e-26,SET|PF00856.24|9.5e-17,PWWP|PF00855.13|1e-15,zf-HC5HC2H|PF13771.2|24,zf-HC5HC2H|PF13771.2|21,zf-HC5HC2H|PF13771.2|2.6e+03,zf-HC5HC2H|PF13771.2|3.1e-13,PHD|PF00628.25|3.6e+03,PHD|PF00628.25|9.8e+03,PHD|PF00628.25|5e-09,PHD|PF00628.25|9.4e-07,PHD|PF00628.25|5.3e+03,PHD|PF00628.25|1.2e+02,PHD_2|PF13831.2|0.51,PHD_2|PF13831.2|1.6e+04,PHD_2|PF13831.2|9e-13,PHD_2|PF13831.2|1.4e+04 R_Transcript_66888:680-3799(+)
MIVKRQSKLEMPNRKRCDMNDSGLDEDDGDYRDSFHPKKRRTAPIYVDNLGHFDNEETEGSSFGEDTESDSMNKSAVNSRRTSRGRVPVLPSRFNDSLVGSWKDNKSKFADIESGLHEIYLKRRDSNSNNNINNNNKRSNRRDRSSFGFDTYLVKKEFKEEKLSLPSYRYHPYCQDIIEEDGMGSFGVNDCFLYSNSNSSKCSVNRWNSTPLVENNEFMPMPSHEKGTTRAKQKKAVYGPEDFALGDIVWAKSGKRYPAWPAIVIDPMLQAPETVLSSCIPGAICVMYFGYSKNGKQRDYSWVKRGMIFPFLDYLDRFQGQTDLHKSKPSDFRMAIEEAILAEQGFTDAHLGMVKETPYDTNSFYDEIGSTHVQECFSQDQGVYEKKRDTRPCSGCGLVLSCKAFVAHEGRLLCKHCVKLLKSKQYCGVCKKIWHHSDGGSWVCCDGCDVWVHAECADISGKHFKDLEDAEYYCPGCKPKFAFEPINSMISPVVKATTLPDAITVVCNGVEATYLPSVHLVVCMCGRCGIKKLKLSEWEKHTGCRAKKWKYSVKVKGSTITLHQWLTDFGANGVDAHTWDQSKLFDLLQEKYEPIIPKWTTERCAICRWIEDWDYNKIIICNRCQIAVHQECYGARKVQDFTSWVCRACEIPDMKRECCLCPVKGGALKPTDVDTLWVHITCAWFQPELAFLDHEKMEPAMGIMRIPSNSFVKRCIICKQIHGSCIRCCKCATYYHAMCAARAGYCLELQCLEENGKQITRKVSYCAIHRNPNPDAVLIIQTSEGAFFSTKFLLQDQREAKTAKGLTRLISKGIELPDPLPSTPDDFDPLSAARCRIYIRSKHKKSVAEPIFHRLMGPMHHSIQEIDSMNLFEEVDHRKQFSTLKERLHQLQITEKQRVCFGKSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSVADLREAKYRLEGKDCYLFKISDDVVIDATDKGNIARLINHSCMPNCYARIMSVSDAESRIVLIAKTNVSAGDELTYDYLFDPDERDDSKVPCLCGAPNCRKFMN*

Click here to download the sequence:
Link to NCBI Protein BLAST