Transcript Information: R_Transcript_66944.p1


Annotated TAIR IDAT2G40770.1
Annotated Gene Namezinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17013535-17021315 | Reverse length=1664
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.808831697885
Replicate 28.1961461866031
Replicate 39.6732669005439
Condition 2: 8 Hour
Replicate 18.1865391841693
Replicate 29.725636559841
Replicate 310.661337563179
Condition 3: 24 Hour
Replicate 19.9576031349078
Replicate 27.5864776063371
Replicate 38.9924184316048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66944.p1 GENE.R_Transcript_66944~~R_Transcript_66944.p1 ORF type:complete len:1660 (+),score=364.66,SNF2_N|PF00176.19|1.2e-77,Helicase_C|PF00271.27|8.5e-07,PHD|PF00628.25|4.6e-06,PHD|PF00628.25|4.1e+03,PHD|PF00628.25|4.6e+02 R_Transcript_66944:303-5282(+)
ATGGGTAGGAAGAAAAATAAACCTCAACGCTCAGTGGGCATACTAGAAAACAGTAGTACAAGCAATTATGGTGAAAATAAAGCAACCCCAGAAGCTAATTTTAAGGTAAAAGACGATGGGCATCATCAAGATGACCCCTTTTATTTTGTTGATGTTGATTGTACTAGTTGGGGTTCAATTGAGCATAGGGATATATCTGAAGTAGTGCTCACTAATTTGATATTAACACAAGATTTTATTGGGTTTGATTTGACTGGTGAGGTTAATTTAAGGTTTAGGTTATGTAATGTGAATGAGCATGTGGTTAGGATTAAATTAGGGCATTGGCCCGTTTTGGCTTCAGAAAATGTTTACTTGGAGGTTATACAGAAAATGGTAGTGGACAAAATTGAAGCTTTTGATGTTATTGCTTGTGGGAAATTTGATGGTAGTGATGAGGGGGTTACTGGGTTGGTTCACTTGACTAGTTTGAAGTTGTTGTCATTGAGATTGGTACCTGGGGTTCAGTTATATGAGGATGTCTCTTCACTTAGGTTAAGGGTTGAGATACTTGGGAGTGCCTTTGAGGCTTGTGAGGGTCTTATTGAGAATAGTAGGCAACTTTGGAAGAAGAGCATGATGAGTGTCATGGCCTGGCTCAGGCCTGAAGTGACCAGTTCCGAGGCTCGGTATGGGGTTCATGTGTTAAGTGGAATGGAAGTTGGTTCTAATGTTGGGGTGGACAATGCTGGTTCCAGAGAAAAATCATTTGATGTCCAATGTTTTTATGAAGCCATTAAACGATCCAAAGATTGTCCAATGTTGGATGCTGAGTTGCCTGACTTGTTACCTGAGCTTAGACCATATCAGCGTCGAGCTGCTTACTGGATGGTACTAAGAGAGAAGGGGGCTTTGCAAAATCTGTCTGCAGAGGAACAAAGTCTTTTCTTTGCTCCTTTGTGTGTGTCTGTGAATTTTCTGGACTCGTGCTTGAGTATGTTCTACAATCCCTTCAGTGGGACTGTGTCCTTGTGTCCAGAGATTCCCTCTTCATATGTCTTTGGTGGTATTCTTGCTGATGAAATGGGCTTGGGGAAAACTGTTGAGCTTCTTGCTTGTGTATTTACTCATCGCAAATCATCTGAGAGCGGCAGTTGTTCTGGAAATATGTCAGATGATACGCTGATGGAGAAAATCCGCCTTAAGAGAGTGAAAAAAGAGCGTATTGAATGTATATGTGGTGCATTGAGTGAAAGCCACAAATATAAAGGATTATGGGTTCAGTGTGATGTGTGTGATGCATGGCAGCATGCAGATTGTGTCGGCTATTCACCTTCTAGGGCTAGGAAAAGATCCAAAGGAGCTTCTAAAGGGCAAGATGGTAACAATATGACGAAGAAGAAAAATGTCGATATAGTTGTGATGGATGATCAATTTATCTGTCAACTCTGCTTAGAGTTGATGCAAGTTACCGGCTCTCTAGTTGACTCCGGTGCAACTCTCATTGTCTGTCCTGCTCCCATACTGCCTCAGTGGCATGCTGAAATATCACGTCACACAACTCCAGGTTCCTTGAGAACTTGTATTTATGAAGGTGTCAAAGACATTTCTCTATCGAATTCATCTGCAATAGATGTCAGTGAACTAGCCAGTGCTGATATTGTGTTGACAACATATGATGTACTGAGAGAAGATCTGTCACATGACTCAGAAAGACATGAAGGAGATCGTCGCTTAATGAGATATGAGAAAAGGTATCCTGTGATCCCGACCCTACTCACTAGAGTATTCTGGTGGAGGGTTTGCTTAGATGAAGCTCAAATGGTGGAGAGCAATGTTGCTGCTGCAACAGAGATGGCATTGCGTCTACATGCGAGGCATCGTTGGTGTATAACAGGAACTCCCATCCAGCGCAAACTGGATGATTTATATGGTCTGCTTAGATTTCTCAAAGCTAGTCCATTTGATGTGTCTAGATGGTGGGTTGAAGTTATCAGAGATCCATATGAGTGCAGGGATGCTGCTGCTATGGATTTCACACATCATTTATTCAGACAATTGATGTGGCGTTCCTCTAAGTCGCATGTTGCAGATGAGCTTCAGCTTCCTCCACAGGAGGAACGTGTATCTTGGCTTTCTTTCTCACCAGTTGAAGAGCACTTTTATCAGAGACAACATGAAACTTGTGTGGATTTTGCTCATGAAGTTCTTGAAAGGTTTAAAAGTGATATGTCGCAGAGAGAGAGCTCAGGTTCTTTATCATCTGATTCTCTATCTGATCCCTTTATCACCGATTTGGAGGCTGCCAAACTGCTGAATTCACTTCTTAAGCTTCGTCAAGCCTGCTGCCATCCCCAAGTTGGTGGATCTGGACTGCGCTCACTTCAAAGATCTCCTATGACTATGGATGAAATATTGACGGTCCTTATAAGTAAGACTAAGATTGAGGGGGAAGATGCATTACGAAAAGCTGTTTCTTCATTGAATGGACTTGCTGGTATAGCTATGATCCAAAGTGACCTATCTCAAGCTGCATCATTGTACAAGGAAGCACTAGCTTTGGCTGAGGAACATTCTAAAGATTTTCGTCTAGACCCTTTGCTAAATCTTCATGTACATCATAATCTTGCTGAGGTTCTGAAATCAGCTTTATCCATCTCACTACAAAAGCCATTTTGTGGGGGACAATTGAGTGATATTTTTGAAGAGAAGCCATATCAGAATAGCAGCATCATTGAATTTGGCAGTCCCATTATGAAAAAACCGAAAATGGCAGGAGAGAAATCTATGGAGATTGATAATATCAATAAATGTGCGAAATTGAACTGTGAACATGCAGTTGATGGCTTAAAAGGTGGTGAAGAATGTGATACAAAGCCCCATGCACCAGATGTTACCAGTGCTGAAAGCTTGATCAATGTTTCTGAGAGTATAAAACAAAAGTACTTGTCTGTATTTTACTCAAGATTGTCGCAATCTCAACAGGAGTTCCAGAAGTCCTATATGCAGGTTTGTGATGGATTAAGCGGTAGAAAGGACAAGAATGCAGTATGGTGGCTGGAAGCCCTCCAAAAAATTGAACAGAACAAAGAAGCTGCTAAAGAGCTATCACAGAAGATTGAAAATGCTGTGTTAGGCAACCGGAACTCAGCTACAATGGCATCCTGGTTTCGGAATATGAATTCACTTAAATACTATATTCAGACTGGCTTAGATTCACTGGAAACCTCTCGAAAACATTTATTTGATCAACTCCTTGAGGTTGATCGCACCATGGAAAAACCAAGGGAGGAAGATATTGAACGTGTACGACACTGTCCGAATTGCTATCCGAATGCGGATGGTCGTTTGTGTGTTCACTGTGAATTGGATGAACTCTTCCAGGCTTACGAGGCTAGGCTCTTTTGCAAAAAACGCAATAATGGGGCAGTTATATCATCTGCAGAGGAGGCAGTAGATCTGCAAAAGAAAAAATTAGAATTGAATCATTTCTATTGGAATCTGGCACAGAAATCAAAAAGCTCGGCCTCATCTATAGATGTTCAAGATGCGAAAGGCAAGAGGGATGTTGCAAAAGTTTTGATGGATATAAGAACCCCATCAGAGCTGGAAATTATCCTGGGGATATTAAGGAGTTATTTCAAGGCACAATTAGGGAGAGAAGGTGTATCAGCCGCCAGGAGACACGTACTTCTTCTTGAGAGTATGAGGAAAGAATACGCTCAAGCAAGGTCATTAGCTATTGCTCAAGCTCAGGTTCTTCGGGCTCATGATGAAATCAAAATGGCAACTTCGAGATTGCGTTTACGAGAGAACAATGACGATAATGCTATAGATGCTGTAAGCTTGGAAGAACTTGACATAGCTAGTGTAGAGAACTCCAGTGAAAAGTTTCTGTCCTTGGCTACATTATCACGAATAAGAGGAAAACTCCGTTATTTGCAGGGATTAGTGTCGTCCAAACAGAAAACAGGTTCAGATAGCAAGGTAGCTGCTCCACTGGGTTCACCTCCTGCAGAAACCAAAGTGGCTGAGGATTTATGCCCCATTTGTCAAGAAAGTCCTGAATATCAAAGAATGGTTTTTCAATGTGGACATGTAACTTGCTGTAAATGTTTGCTTGCTATAACCGAGCGGAAGGCGGTTCCCAATGGAAAGTCGCAAGACAAGTGGGTGATCTGCCCTACATGCCGACAACATTCAGATTTTGAGAGTATTGCTTTTGCTGACGACAGGCAAAATAATTCTTCTGATAGATGTGAAAATATTGAAGCTTCTGTGTCTGTTCAAGGATCATATGGAACAAAGATTGAAGCAATCACGAGGAGGATCCTCCAGATAAAGTCAACTGATCCCAATGCTAAAATTCTAGTTTTCTCCAGTTGGAATGATGTCCTTGACGTACTAGAGCATGCTTTTGGTGCCAACGAGATCAGCTATGTTCGAATGAAAGGGGGGAGGAAAAGATCTCAAGTTGCAATTAGCATCTTCAAGGGAGAAAAGATTACGATCAAGGCTTGTGGCAAGACAAATGATCAGCAGAAGTCAGAGGGTAAGTTTGTGCAGGTGCTACTGCTCTTAATTCAACATGGAGCAAACGGCCTCAATCTTCTTGAAGCACAACATGTTATTCTTGTCGAGCCCCTACTCAATCCAGCAGCTGAAGCACAAGCAATCAGCAGGGTGCATCGGATTGGACAGACAAATAGGACGCTCATTCATAGGTTCATAGTAAAGAACACAGTTGAAGAAAGCATATACAAACTAAACAAAAGTAGGAATAGCAGCTCATTTATCAGTGGGAATAAGAAGAATCAAGATCAGCCTATTTTGACATTAAAGGATGTTGAGTCCTTATTTGCAGTCGTGCCTTCCAAAACAACGGATAACAATGAAGAGCAAACAGAGAGTTTAACATATATTCCTCCTTCTGTTGCTGCTGCCATAGCTGCTGAAAGAAGACTTAACCAATGTACTACTACAACAACAACAACAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66944.p1 GENE.R_Transcript_66944~~R_Transcript_66944.p1 ORF type:complete len:1660 (+),score=364.66,SNF2_N|PF00176.19|1.2e-77,Helicase_C|PF00271.27|8.5e-07,PHD|PF00628.25|4.6e-06,PHD|PF00628.25|4.1e+03,PHD|PF00628.25|4.6e+02 R_Transcript_66944:303-5282(+)
MGRKKNKPQRSVGILENSSTSNYGENKATPEANFKVKDDGHHQDDPFYFVDVDCTSWGSIEHRDISEVVLTNLILTQDFIGFDLTGEVNLRFRLCNVNEHVVRIKLGHWPVLASENVYLEVIQKMVVDKIEAFDVIACGKFDGSDEGVTGLVHLTSLKLLSLRLVPGVQLYEDVSSLRLRVEILGSAFEACEGLIENSRQLWKKSMMSVMAWLRPEVTSSEARYGVHVLSGMEVGSNVGVDNAGSREKSFDVQCFYEAIKRSKDCPMLDAELPDLLPELRPYQRRAAYWMVLREKGALQNLSAEEQSLFFAPLCVSVNFLDSCLSMFYNPFSGTVSLCPEIPSSYVFGGILADEMGLGKTVELLACVFTHRKSSESGSCSGNMSDDTLMEKIRLKRVKKERIECICGALSESHKYKGLWVQCDVCDAWQHADCVGYSPSRARKRSKGASKGQDGNNMTKKKNVDIVVMDDQFICQLCLELMQVTGSLVDSGATLIVCPAPILPQWHAEISRHTTPGSLRTCIYEGVKDISLSNSSAIDVSELASADIVLTTYDVLREDLSHDSERHEGDRRLMRYEKRYPVIPTLLTRVFWWRVCLDEAQMVESNVAAATEMALRLHARHRWCITGTPIQRKLDDLYGLLRFLKASPFDVSRWWVEVIRDPYECRDAAAMDFTHHLFRQLMWRSSKSHVADELQLPPQEERVSWLSFSPVEEHFYQRQHETCVDFAHEVLERFKSDMSQRESSGSLSSDSLSDPFITDLEAAKLLNSLLKLRQACCHPQVGGSGLRSLQRSPMTMDEILTVLISKTKIEGEDALRKAVSSLNGLAGIAMIQSDLSQAASLYKEALALAEEHSKDFRLDPLLNLHVHHNLAEVLKSALSISLQKPFCGGQLSDIFEEKPYQNSSIIEFGSPIMKKPKMAGEKSMEIDNINKCAKLNCEHAVDGLKGGEECDTKPHAPDVTSAESLINVSESIKQKYLSVFYSRLSQSQQEFQKSYMQVCDGLSGRKDKNAVWWLEALQKIEQNKEAAKELSQKIENAVLGNRNSATMASWFRNMNSLKYYIQTGLDSLETSRKHLFDQLLEVDRTMEKPREEDIERVRHCPNCYPNADGRLCVHCELDELFQAYEARLFCKKRNNGAVISSAEEAVDLQKKKLELNHFYWNLAQKSKSSASSIDVQDAKGKRDVAKVLMDIRTPSELEIILGILRSYFKAQLGREGVSAARRHVLLLESMRKEYAQARSLAIAQAQVLRAHDEIKMATSRLRLRENNDDNAIDAVSLEELDIASVENSSEKFLSLATLSRIRGKLRYLQGLVSSKQKTGSDSKVAAPLGSPPAETKVAEDLCPICQESPEYQRMVFQCGHVTCCKCLLAITERKAVPNGKSQDKWVICPTCRQHSDFESIAFADDRQNNSSDRCENIEASVSVQGSYGTKIEAITRRILQIKSTDPNAKILVFSSWNDVLDVLEHAFGANEISYVRMKGGRKRSQVAISIFKGEKITIKACGKTNDQQKSEGKFVQVLLLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRIGQTNRTLIHRFIVKNTVEESIYKLNKSRNSSSFISGNKKNQDQPILTLKDVESLFAVVPSKTTDNNEEQTESLTYIPPSVAAAIAAERRLNQCTTTTTTTT*

Click here to download the sequence:
Link to NCBI Protein BLAST