Transcript Information: R_Transcript_66982.p1


Annotated TAIR IDAT5G57120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23122767-23124400 | Reverse length=330
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.178388652285
Replicate 21.3913211119234
Replicate 34.553749040199
Condition 2: 8 Hour
Replicate 13.3188672368254
Replicate 23.2328985794485
Replicate 36.3421290119424
Condition 3: 24 Hour
Replicate 15.5320017416155
Replicate 23.6537326475354
Replicate 34.8785847796096


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_66982.p1 GENE.R_Transcript_66982~~R_Transcript_66982.p1 ORF type:internal len:332 (+),score=99.48 R_Transcript_66982:2-994(+)
CTGCTAGAATCTTCCGAGGTTTTCTGCTTCTCTATCTCTCTCTCTCTCTCCTCAAGAGTACCCTGTCGGAGCAGAGGAGGGAGGGGCATGCCCTTTTGTGAGGAGAAGAAGCAGAGCAATCCCAAACCCACTCTCATAACTTCCTTCACACCTCGTCAAGTCATACTCTCTTCTTCTTCAGTATCAAAATCAAACATGAAGAAACAAATTGAGAACAACAACAAAACACCCCTTTCTTTAACCCCTGAGAATAAGTTACTTCTTCACCAGTCCATTTGTGGGTACCTCCAACTCAATGGCTTCCTCAAAACCCTCAAGAAGTTCACTCGTGAGGCCGATATTGAGAAAGACAGCTGGAAGTGTTGTCTACTGAACTTGGAAGAAATGTGTCAAGAGCATCTACAGAAGCGCAACGATACCAATGATAAAAAGCAAGATAACAAGCAGGCAGGTAAAGTTGAAAAGCATGTTGAATCTATGGAAAAAGTTACAACAAAAGAAAATGGAGCTGTTGATGGGGAGAAGTCCAAGGCAATATTAGAAAATGACTCTGTTAATGGTGACAATGCAAAATCCAAGAAGAAAAAGAAAAGCAAAAATGCTAACGATACATTTAATGATGTTAATGGAGAAACTCACTTGAAAGATTTGGAACAGACGATGCAGGATTCGAGTGTGCCTACTGAACCTGAGAAGAAATCCAAGGACAAGAAGAAGAAACGCAAGCATGAATCAGAGCATTTGGACAAGGATTTACAGGAAAAACAGGCTGAAGTAGCAGCAGGAGAAACAACTTCAGACAAAACTGATAAAATGTCTCAAGATAAGAAAATAAAGGAGGACACTCCTATTCCTAAAGATGAGGTTGATAAGGAGAAGAAAAGTTCTAAAAAAAGAAAGAAGTGCTCATCTGATGACAAAGAAATCAACAATGTTGAAACAACACCATTAGATGATTCCAAACGCAGGAAGACAGATGATCCATATCAGTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_66982.p1 GENE.R_Transcript_66982~~R_Transcript_66982.p1 ORF type:internal len:332 (+),score=99.48 R_Transcript_66982:2-994(+)
LLESSEVFCFSISLSLSSRVPCRSRGGRGMPFCEEKKQSNPKPTLITSFTPRQVILSSSSVSKSNMKKQIENNNKTPLSLTPENKLLLHQSICGYLQLNGFLKTLKKFTREADIEKDSWKCCLLNLEEMCQEHLQKRNDTNDKKQDNKQAGKVEKHVESMEKVTTKENGAVDGEKSKAILENDSVNGDNAKSKKKKKSKNANDTFNDVNGETHLKDLEQTMQDSSVPTEPEKKSKDKKKKRKHESEHLDKDLQEKQAEVAAGETTSDKTDKMSQDKKIKEDTPIPKDEVDKEKKSSKKRKKCSSDDKEINNVETTPLDDSKRRKTDDPYQS

Click here to download the sequence:
Link to NCBI Protein BLAST