Transcript Information: R_Transcript_67190.p1


Annotated TAIR IDAT5G23420.1
Annotated Gene Namehigh-mobility group box 6
Annotated Gene Symbol(s)HMGB6
Annotation TypeOrtholog
Chromosome Positionchr5:7888712-7890111 | Reverse length=241
E-Value2.6E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 198.01840032684
Replicate 2115.1647077834
Replicate 3113.38835110096
Condition 2: 8 Hour
Replicate 157.664211950762
Replicate 256.349422239788
Replicate 367.887023720247
Condition 3: 24 Hour
Replicate 1131.43344637861
Replicate 2132.99321111018
Replicate 3124.75991671532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_67190.p1 GENE.R_Transcript_67190~~R_Transcript_67190.p1 ORF type:complete len:200 (+),score=81.59,HMG_box|PF00505.15|9.6e+03,HMG_box|PF00505.15|9.1e-22,HMG_box_2|PF09011.6|3.6e+03,HMG_box_2|PF09011.6|5e-17 R_Transcript_67190:233-832(+)
ATGGGAGGAGGATCAACAAGCACAAACCCACCAAAACCCAGAAAGAGAGTTGAAGCTGACACTCCTTCTACTACTGTTTCTCTCAAGCGCGCTAAAGATGGCAGTGCATTTGCTCGCTGTGAGGAATGTAGTCAGAGTGTTCCGGTTGCCCTTATCGACTTTCACAACTGCAGTCTTGAAGCTAAGATCAAGATGAGCCTTGAAGCTCAGGTTGTTGAAAGGCAAGCTGAAGTCAAGAAGAAGCCTGCTGAGAGGAAGAAATCAACTGGGACATCAGAGACGAAGTCAAAGAAGAGAAAATTGACTAAAGTGAAGGATCCGAACATGCCAAAGCGCCCCCAAACAGCTTACTTCCTCTTCATGGATGACTTTAGGAAGGCCTACAAGGAAGAACATCCTGATTCTAAGGGTGTCAAGGAGGTTGCTAAGGAAGCTGGGGTGAAATGGAGGAACATGACTGAGGAGGAGAAACAACCTTATTTGGACAAGGCTAAAGAGCTCAAGGAAGAGTATAAGAAGGTTATGGAGGCTTACAATGCTGAAAATGAAGAGGATTCTGGTGATGTTCAAGCAGAAGAGTTGTGTGATGAAGATGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_67190.p1 GENE.R_Transcript_67190~~R_Transcript_67190.p1 ORF type:complete len:200 (+),score=81.59,HMG_box|PF00505.15|9.6e+03,HMG_box|PF00505.15|9.1e-22,HMG_box_2|PF09011.6|3.6e+03,HMG_box_2|PF09011.6|5e-17 R_Transcript_67190:233-832(+)
MGGGSTSTNPPKPRKRVEADTPSTTVSLKRAKDGSAFARCEECSQSVPVALIDFHNCSLEAKIKMSLEAQVVERQAEVKKKPAERKKSTGTSETKSKKRKLTKVKDPNMPKRPQTAYFLFMDDFRKAYKEEHPDSKGVKEVAKEAGVKWRNMTEEEKQPYLDKAKELKEEYKKVMEAYNAENEEDSGDVQAEELCDEDA*

Click here to download the sequence:
Link to NCBI Protein BLAST