Transcript Information: R_Transcript_67415.p1


Annotated TAIR IDAT5G52960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21477250-21478269 | Forward length=170
E-Value2.1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4166431068981
Replicate 26.0655978980417
Replicate 38.0173581586533
Condition 2: 8 Hour
Replicate 17.2097269011333
Replicate 23.7268136401976
Replicate 35.7480100297892
Condition 3: 24 Hour
Replicate 15.9945385539005
Replicate 23.5533472657041
Replicate 36.2015163279542


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_67415.p1 GENE.R_Transcript_67415~~R_Transcript_67415.p1 ORF type:complete len:180 (+),score=39.78,DUF3143|PF11341.4|1.5e+04,DUF3143|PF11341.4|2.4e-22 R_Transcript_67415:89-628(+)
ATGTTATCCATTAATTATTCTCTCTCAAACACTCTCACCAACATCAAAGATACCACCTTTACTCCTTTCCTATCACCAAACTCACCTTCATCTTCTACCCTCAATAGGCATCATCATTATCTCACAAACCATTTACAATTCCCCAAAACCCCACCATTTTCCCATCATATATCCTCAAGAAAACATCATATTTTCCTTTCAAAAGCTTCAGACTCAGAATCAGAAACAGAGCCTGTTGTTACAGAAGAAGATGAATGGCTGAGCAAATTGCCTGATAAAAAGAAGCCTTTGTATGCTCACAGCTTGCCTTGCATTGAAGCTTGGCTTAGGAGCTTAGGGTTTTACCAAAGCAATGATGATAGGGCTGTTTGGTTCATTGAGAAATCTGATTGGCATGCTCAGCTTTCTCTTGATATGACTGATCTCTATATAAGATATTTGAAGAGTGGACCTGGCAATTTAGAGAAAGATGTGGAGAGGAGATTCAGTTATGCGCTGAGTAGAGAGGATATTGAGAATGCTGTGCTCGGAGGACCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_67415.p1 GENE.R_Transcript_67415~~R_Transcript_67415.p1 ORF type:complete len:180 (+),score=39.78,DUF3143|PF11341.4|1.5e+04,DUF3143|PF11341.4|2.4e-22 R_Transcript_67415:89-628(+)
MLSINYSLSNTLTNIKDTTFTPFLSPNSPSSSTLNRHHHYLTNHLQFPKTPPFSHHISSRKHHIFLSKASDSESETEPVVTEEDEWLSKLPDKKKPLYAHSLPCIEAWLRSLGFYQSNDDRAVWFIEKSDWHAQLSLDMTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP*

Click here to download the sequence:
Link to NCBI Protein BLAST