Transcript Information: R_Transcript_67615.p1


Annotated TAIR IDAT2G19570.1
Annotated Gene Namecytidine deaminase 1
Annotated Gene Symbol(s)CDA1, AT-CDA1, DESZ
Annotation TypeOrtholog
Chromosome Positionchr2:8470598-8471503 | Reverse length=301
E-Value6E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 184.530702673795
Replicate 283.849303280621
Replicate 377.245374029744
Condition 2: 8 Hour
Replicate 149.050972175873
Replicate 263.39201454006
Replicate 372.195240946458
Condition 3: 24 Hour
Replicate 173.777030993884
Replicate 274.159915816537
Replicate 376.075711436012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_67615.p1 GENE.R_Transcript_67615~~R_Transcript_67615.p1 ORF type:complete len:309 (+),score=57.13,dCMP_cyt_deam_2|PF08211.7|4.9e+03,dCMP_cyt_deam_2|PF08211.7|2.4e-46,dCMP_cyt_deam_1|PF00383.18|2.9e-10,dCMP_cyt_deam_1|PF00383.18|9.5 R_Transcript_67615:264-1190(+)
ATGGAGCACCTCAAATTTGTCATTGAGGCAGCAGAAGCAGAAACAATGGCAAAAAAATTAGGCCTGAAATCAGTCTTAAATCTTCTTCCAAGAATCGTAAGATCTGCCCAGAAACTTGCTCGTCCACCCATCTCAAAATTCTGTGTCTCAGCAGCCGGTTTAGCCTCAGACGGTCGAATATTCCTTGGTGTAAACATCGAATTCCCAGGTTTACCCCTTCACCATTCAATCCATGCTGAACAATTTCTCATCACAAATGTCTCTCATTTCCCTCAAACCCGCCTCACAAACGTCGTCGTTTCTGCATACCCATGTGGGCATTGTCGTCAATTTCTCCAAGAAATCCGAGGTGCCCCAGAAATCCAAATCTGGGTTCTTCAAAATGACAAAATTCATGGATACCCAGATGATCAAAATCACACCTTTAAGCCTCTATCATATTTTTTGCCCCACAGATTTGGCCCAGATGATTTACTAGACAATAGAGTTCCCTTATTATTGGAGCCCCAAGAGAATAATTTGGTACTTGTTGATGAAATTAATGGCAAAATGGTAAATGGGTTTTCAACATTTGATGATAAAGATTTGGTGTTTGAAGCATTAGAAGCAGCTAATAGGTCACATGCTCCTTATAGTGGGTGCCCATCTGGGGTTTCATTAATTGATATTGATGGGAAAATATTCAAAGGATGTTACATGGAATCTGCTGCTTATAATCCCAGTCTTAGCCCTGCTCAAGCTGGTATTATTGCTTATGTGGCAGCTGGTGGTGATGGCTATGATAGATTTGTGAGTGCTGTTTTGGTTGAGAAAGAAGATGCCATTGTTAAACAAGAAGATACTGTCAGCTTGTTCTTGAGGGCTGTTTCTCCCAATTGTCATTTCCATGTCTTTCATTGCGAATTTTCTTTAGGTAAAGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_67615.p1 GENE.R_Transcript_67615~~R_Transcript_67615.p1 ORF type:complete len:309 (+),score=57.13,dCMP_cyt_deam_2|PF08211.7|4.9e+03,dCMP_cyt_deam_2|PF08211.7|2.4e-46,dCMP_cyt_deam_1|PF00383.18|2.9e-10,dCMP_cyt_deam_1|PF00383.18|9.5 R_Transcript_67615:264-1190(+)
MEHLKFVIEAAEAETMAKKLGLKSVLNLLPRIVRSAQKLARPPISKFCVSAAGLASDGRIFLGVNIEFPGLPLHHSIHAEQFLITNVSHFPQTRLTNVVVSAYPCGHCRQFLQEIRGAPEIQIWVLQNDKIHGYPDDQNHTFKPLSYFLPHRFGPDDLLDNRVPLLLEPQENNLVLVDEINGKMVNGFSTFDDKDLVFEALEAANRSHAPYSGCPSGVSLIDIDGKIFKGCYMESAAYNPSLSPAQAGIIAYVAAGGDGYDRFVSAVLVEKEDAIVKQEDTVSLFLRAVSPNCHFHVFHCEFSLGKEN*

Click here to download the sequence:
Link to NCBI Protein BLAST