Transcript Information: R_Transcript_67626.p1


Annotated TAIR IDAT2G05170.1
Annotated Gene Namevacuolar protein sorting 11
Annotated Gene Symbol(s)ATVPS11, VPS11
Annotation TypeOrtholog
Chromosome Positionchr2:1870020-1873278 | Forward length=932
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.966688946846
Replicate 28.3059866284831
Replicate 39.9030177225759
Condition 2: 8 Hour
Replicate 18.7357755320707
Replicate 210.816753965149
Replicate 312.913737671167
Condition 3: 24 Hour
Replicate 112.406370117804
Replicate 211.085486892536
Replicate 311.437646310677


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_67626.p1 GENE.R_Transcript_67626~~R_Transcript_67626.p1 ORF type:complete len:953 (+),score=211.18,Clathrin|PF00637.16|1.6e-14,Clathrin|PF00637.16|14,Clathrin|PF00637.16|0.0097,Clathrin|PF00637.16|2.1e+03,VPS11_C|PF12451.4|3.6e-14,zf-C3H2C3|PF17122.1|1e-06 R_Transcript_67626:287-3145(+)
ATGTACCAGTTGAGGAAATTTGAGTTCTTTGAGGAGAAGTATGGGGGCAAATGCAAAGTACCTGAAGAAATTACAAAAGCAGATATTAACTGCTGTTCAAGTGGTAGAGGAAAAGTAGCCGTTGGATGTGATGATGGAACAGTTGGTATCCTTGATCGAGGTTTCAAGTTCAATTATTCCTTTCAGGCTCATTCTTCTTCTGTTCTCTTCCTTCAACTGCTCAAGCAAAGGAATTACCTTCTTACTGTTGGAAAAGATGAACAAATATCTCCACAGGCATCAGCTATGTGCTTGAAGGTTTTTGACTTAGATAAAACACAAGCCGAGGAAACAAGCACAAGCACAAGCACGACAATTCCTGATTGTGTCCAGATATTGAGAATATTCACTAACCAGTTCCCTGAAGCAAAGATCACATCATTTCTTGTTCTGGAGGAAGCTCCACCAGTACTATTAATAGCCATTGGGTTGGACAATGGCAGCATTTACTGCATCAAAGGAGACATTGCTCGTGAGCGTATTACACGCTTTACCCTTAAAGTGGAAAATGCTTCAGCAGGCAATGCTGCCATTACCGGGCTTGGGTTCAGAAATGATGGTCCTGCCCTTCAACTCTTTGCTGTGACTCCGTCTTCAGTTAGTTTGTTCAATCTCCAACAACAACCACCAAAAAGGCAAACCTTGGATCATATTGGCTGTAGTGGAAAAAGTATTGCAATGAGTGACCGCTTGGAGCTAATAATCGGTCGACCTGAAGCTGTGTATTTCTATGAAGATGATGGGCGTGGCCCTTGTTGGGCGTTTGAAGGAGAGAAGAAATTTGTTGAGTGGTTTCGTGGATACCTTCTGTGTGTGATTGCTGATCAAAGAAGTGGGAGGAACACATTCAATATTTATGACCTTAAGAACCGTTTGATAGCTCATAGTGTTGTGGTCAATGAAGTTTCACACATGGTTTGTGAATGGGGCAACATAATTCTGATTTTGGGTGATAAGTCAGCCCTTTGTGTTGGAGAGAAAGACATGGAGAGCAAATTAGATGTTCTTTTCAAGAAGAATCTCTATTCTGTAGCTATCAATCTTGTTCAAACTCAGCAAGCAGATGCTGCTGCAACTGCAGAAGTGCTAAGAAAATATGGCGATCATCTATACAGCAAGCAGGACTATGATGAGGCTATGGCCCAATACATTCACACTATTGGTCACCTTGAACCTTCATATGTGATACAGAAATTCCTGGATGCTCAGAGAATCCACAACCTGACCAATTACTTGGAGAAATTGCATGAGAAGGGACTTGCGTCAAAAGATCATACCACTCTCTTATTGAACTGCTACACAAAGTTAAAGGATGTGGAAAAGTTAAATTACTTCATCAAAGGTGAGGATGGTGGGGAGCATAAGTTTGATGTTGAGACTGTCATACGAGTATGTCATGCTGCGAATTATCATGAACACGCAATGTATGTTGCTAAAAAAGCTGGTAGACATGAGTTGTACCTTAAGATTTTGCTTGAAGATCTGGCTAGATATGATGAAGCCCTACATTATATTTCAAGCCTTGAGCCAAGCCAAGCTGGAGTCACGGTAAAAGAATATGGAAAAATTCTCATCGAGCACAAGCCATGGGAGTCCATACAAATACTCCTACGGCTATGCACTGAGGATGGTAAGCCCGCCAAAAACGGGAGCTTGACTATGTTGCCATCTCCTGTTGATTTCCTCAACATCTTTGTACATCGTCCACAAGCCCTGATGGATTTTCTTGAGAAATACACTGATAAGGTCAAGGACTCACCTGCCCAGGTGGAAATTCATAATACCCTGTTAGAATTGTATTTGTCTCTTGAGTTAACCTTCCCATCGATGTCACAGTATAGTTCTAATGGTTCTCTCGACGATAATGGATGGTTGTCATCTGGAGCTGCAGTAATTTCAAAACCATCATCAAATGGTAAGTCTTCAAAAGATGATGATGAGAGGGGTCGTCTTCTAAGACGTGATAAGGGATTACGCTTGCTTAAAAGTGCATGGCCATCTGACCAGGAAAATCCACTTTATGATGTTGATCTTGTTATTATCCTATGTGAAATGAATGCATTTAAGGAAGGGCTCTTGTTTCTCTATGAGAGAATGAAACTGTACAAGGAGGTCATCGCCTGCTACATGCAGGCACATGACCATGAAGGATTGATTGCATGCTGCAGGAGGCTTGGAGATTCAGATAAGGGTGGAGATGCCACTCTTTGGGCAGACCTACTGAAATACTTTGGGGAACTTGGAGAAGATTGTTCAAAGGAGGTTAAAGAAGTTTTGACATATATTGAGAGGGATGACATTTTGCCTCCCATCATTGTTCTTCAAACATTGTCCCAAAATCCATGCCTCACTCTGTCAGTAATTAAGGATTACATTGCTCGGAAACTTGAACAGGAATCGAAGCTGATTGAAGAAGATAGGCGGGCTATCGAGAAGTATCAGGAGGACACATCAGCAATGAGAAAAGAAATTGAGGATCTGCGGACAAATGCAAGAATCTTTCAGCTCAGCAAGTGCACTGCATGCACTTTCACCCTTGATCTTCCAGCAGTCCACTTTATGTGCATGCATTCATATCATCTACGATGTCTTGGTGACAATGAAAAGGAATGCCCTGAGTGTGCTCCTGATTACAGGTCCATCCTAGAAATGAAGAGAAATTTAGAGCAGTATTCTAGAGATCAGAATCAGTTCTTCCAGAAAGTGAAGAACTCAAAAGATGGATTTTCTGTGATCGCTGATTATTTTGGCAAGGGCATAATCAGCAAGACAAGACCTGACGGGGCTGGAAACAATGCCTCTGGCAGTGGATTTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_67626.p1 GENE.R_Transcript_67626~~R_Transcript_67626.p1 ORF type:complete len:953 (+),score=211.18,Clathrin|PF00637.16|1.6e-14,Clathrin|PF00637.16|14,Clathrin|PF00637.16|0.0097,Clathrin|PF00637.16|2.1e+03,VPS11_C|PF12451.4|3.6e-14,zf-C3H2C3|PF17122.1|1e-06 R_Transcript_67626:287-3145(+)
MYQLRKFEFFEEKYGGKCKVPEEITKADINCCSSGRGKVAVGCDDGTVGILDRGFKFNYSFQAHSSSVLFLQLLKQRNYLLTVGKDEQISPQASAMCLKVFDLDKTQAEETSTSTSTTIPDCVQILRIFTNQFPEAKITSFLVLEEAPPVLLIAIGLDNGSIYCIKGDIARERITRFTLKVENASAGNAAITGLGFRNDGPALQLFAVTPSSVSLFNLQQQPPKRQTLDHIGCSGKSIAMSDRLELIIGRPEAVYFYEDDGRGPCWAFEGEKKFVEWFRGYLLCVIADQRSGRNTFNIYDLKNRLIAHSVVVNEVSHMVCEWGNIILILGDKSALCVGEKDMESKLDVLFKKNLYSVAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIHNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNYFIKGEDGGEHKFDVETVIRVCHAANYHEHAMYVAKKAGRHELYLKILLEDLARYDEALHYISSLEPSQAGVTVKEYGKILIEHKPWESIQILLRLCTEDGKPAKNGSLTMLPSPVDFLNIFVHRPQALMDFLEKYTDKVKDSPAQVEIHNTLLELYLSLELTFPSMSQYSSNGSLDDNGWLSSGAAVISKPSSNGKSSKDDDERGRLLRRDKGLRLLKSAWPSDQENPLYDVDLVIILCEMNAFKEGLLFLYERMKLYKEVIACYMQAHDHEGLIACCRRLGDSDKGGDATLWADLLKYFGELGEDCSKEVKEVLTYIERDDILPPIIVLQTLSQNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQEDTSAMRKEIEDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSYHLRCLGDNEKECPECAPDYRSILEMKRNLEQYSRDQNQFFQKVKNSKDGFSVIADYFGKGIISKTRPDGAGNNASGSGFG*

Click here to download the sequence:
Link to NCBI Protein BLAST