Transcript Information: R_Transcript_67756.p1


Annotated TAIR IDAT3G44330.1
Annotated Gene NameINVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16006754-16010671 | Forward length=565
E-Value1E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.229018219348
Replicate 255.212493687302
Replicate 367.023417410964
Condition 2: 8 Hour
Replicate 157.220054770899
Replicate 261.088193954138
Replicate 368.604764655184
Condition 3: 24 Hour
Replicate 185.150385537675
Replicate 277.796327656357
Replicate 373.152028891835


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_67756.p1 GENE.R_Transcript_67756~~R_Transcript_67756.p1 ORF type:complete len:567 (+),score=95.99,Nicastrin|PF05450.11|8e-07 R_Transcript_67756:542-2242(+)
ATGGAGATTCGGAGAGACAGCAAAATGCAAGTAGTAGGAACCTCGGTCTACTCAGTAATCGCACTCTTGTTCGTTCTTCTCGCTTGCGTTGAACTCGGCGACGCCGCTACTGCCGTCGACGTTTACCGGTTAATCCAGTACGATCTCGCCGGAGCTCCGTTTGGATCTCGTCTTGCTTCTCTCAATCACCACGCTAGCTCTTCTCTTTCTTCCACATCTTCTTCTAACAACGCCGATCTTTCTCGCACTGTCGTCATCATTCCCGTTCGTGACCTCGATGTCTCCTCCATTCAAGATTACATTGATCGAAAGCAGACACTTGGAGGTCTGTTGTTCTTGCTGCCTCGGGCTTTGAATTCTGAAAATGGGGAGGGCAAAGACGATGATTCTGAAAAAGAAGCAATAAGAAACAAACTGGTGCAGCTGGAAAGGCTTCTAGTACATGCGAATTTACCTTATCCTGTTTACTTTGCCTTTGAGGATGAGAACATAAAGGATGTCCTAGCTGATATTAAACGAAATGATGCTACTGGTCAGCCTGCCACAGCTACTACTGGCGGGTACAAGCTTGTCGTTTCAACAGCAGAAGCTAAGAAGGTTGCTTCCCCAAGCATCACCAATATTCAGGGATGGTTACCAGGTTTGAAAGGGGATGGAGATTCAACCCAAATCCCAACAATTGCTATAGTGGCATCATATGATACATTTGGGGCTGCACCAGCGTTGTCAGTTGGTAGTGATAGTAATGGGAGTGGTGTTGTGGCACTTCTGGAAATTGCTCGCCTATTTTCGATTCTGTATTCTAACCCTAAGACAAGAGGAAGATACAATTTACTTTTTGGGCTAACTTCTGGTGGACCTTATAACTACAATGGAACTCATAAGTGGCTTCGGAGCTTGGATCAACGTTTACGCGAGAGTATTGATTATGCTATATGTTTGAATAGTATTGGTTCATGGGACAGCGAGTTGTGGCTTCATGTATCAAAGCCTCCAGAAAATGCTTACATCAAGCAAATATCTAAAGGTTTCACTGATGTTGCTGAAGAATTGGGAATTAAGGTTGGCTTGAAGCACAAGAAGATAAACATTTCAAATCCGCGAGTAGCCTGGGAGCATGAACAGTTTTCAAGGATCAGAGTCACTGCAGCTACACTTTCTGAACTCTCTGCTGCACCTGAATTTTTGGAGAACTTTGGAGGTCTGTCAGATAGCAGAAATTTTGTTAGTGAATCTTCAGTCATCAAGGGCATAAAGTTAGTGGCTGAAAGTCTTGCGAGGCATATCTATGGACATGAAGGAAAGAACATCCAGATATTTGCAGAAAACAGTCATCTAGCAATCAACCCCTCCTATGTAAGTTCGTGGTTGTCTCTTCTATCACGGACACCTCGAGTTGCCCCCTTTCTTTTGAAGACTGATCCGCTTGTTGTTGCTCTGAAAAAGGAATTGGCAGAGCATACAGCTGAGGTGAATGTGCAACATGAGAGTTTGGATGGTTTGTTCACCTTCTATGATGCGACCAAGGCCACTTTGAATATATACCAGGTGGCAAGTGTGACATTTGACTTGCTGTTGTTGCTAGTTCTGGGGTCATACTTGATAGTGCTATTCAGCTTCTTAGTTATCACCACAAGGGGTCTTGATGATCTCATCAGTTTATTTCGAAAGCCACCATCCCGGAAAGTAAAAACAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_67756.p1 GENE.R_Transcript_67756~~R_Transcript_67756.p1 ORF type:complete len:567 (+),score=95.99,Nicastrin|PF05450.11|8e-07 R_Transcript_67756:542-2242(+)
MEIRRDSKMQVVGTSVYSVIALLFVLLACVELGDAATAVDVYRLIQYDLAGAPFGSRLASLNHHASSSLSSTSSSNNADLSRTVVIIPVRDLDVSSIQDYIDRKQTLGGLLFLLPRALNSENGEGKDDDSEKEAIRNKLVQLERLLVHANLPYPVYFAFEDENIKDVLADIKRNDATGQPATATTGGYKLVVSTAEAKKVASPSITNIQGWLPGLKGDGDSTQIPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEIARLFSILYSNPKTRGRYNLLFGLTSGGPYNYNGTHKWLRSLDQRLRESIDYAICLNSIGSWDSELWLHVSKPPENAYIKQISKGFTDVAEELGIKVGLKHKKINISNPRVAWEHEQFSRIRVTAATLSELSAAPEFLENFGGLSDSRNFVSESSVIKGIKLVAESLARHIYGHEGKNIQIFAENSHLAINPSYVSSWLSLLSRTPRVAPFLLKTDPLVVALKKELAEHTAEVNVQHESLDGLFTFYDATKATLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRKPPSRKVKTA*

Click here to download the sequence:
Link to NCBI Protein BLAST