Transcript Information: R_Transcript_67847.p1


Annotated TAIR IDAT1G31870.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303 Blast hits to 9618 proteins in 489 species: Archae - 8; Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942; Viruses - 128; Other Eukaryotes - 2334 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11437269-11439821 | Forward length=561
E-Value2.1E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.390831445677
Replicate 219.24660871494
Replicate 322.94915748059
Condition 2: 8 Hour
Replicate 122.173311035561
Replicate 227.081512452103
Replicate 325.950080368405
Condition 3: 24 Hour
Replicate 127.591883131074
Replicate 221.238397450185
Replicate 323.873811223301


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_67847.p1 GENE.R_Transcript_67847~~R_Transcript_67847.p1 ORF type:complete len:540 (+),score=161.96,Bud13|PF09736.5|2.1e+02,Bud13|PF09736.5|1.2e+03,Bud13|PF09736.5|6.8e-38 R_Transcript_67847:259-1878(+)
ATGATGGTAACAACGACATCAACTTCCACTTCATTGAAAGAATATCTAAAGAAGTATGAAACTAGTACTAGTAATCCAGAAGAGGAGAAAAAAAAGAAGAAAAAGAAGAAAGCCAAACCAGTAGCTTCAGGTGTCCTTGTTGTTGATGAAGATCCCGTTTGGCAAAAGCCCGTCAACCTCGAAGAAGAGGAGGACAATGATTCACCTGATGAGAAACCTTTAGTTGATGAAGACATTGAAGTTAAGAGGATGAAAAGGTTAGAGCAAATTAGGGCTAGGCGTGCTCTTAATGCGATTTCTGAGGATGGAAGTGGTTGGGTTTCAGTTTCTGATGTTCCTAAACGGGCAACTTCTGCTGATCCTAATTCGGATATGTCCCCACCTCGGAAGCGGCCAGCTAGGTTTGACACGCCATCTCCTGAGCCGGGGCTGAACCATTCAGGTTCAGGTAGAGGAGAAGGTACTGATTTGTCACCACCACGGCCAAGTCGTAGACGGAATGATTTTCCTTCACCAGAGCCTTCTAGTTTTCAGAAGGAAGGTTCTGATCTGTCACCACCACGAAATCGTCGTAGGCGCCATGATTCTCCGTCTGAATTGAAGTCTAGGAATGTCGGTGAGGATGGTGATTTGTCAACACCTAGGCCACGTCGTAGGCGCTATGATTCTCCCTCGCCAGAACGTGGTGGTAGTGATGGTGATTTATTCCCTCCTCGTCGGCGAGGAAGAAGTTCTGGTTCTCCATCCGTGCCAGAGAAAGGTCCTTCTGTTTCTAGTGTGAAGGACTCTGATATGGATGACCTATCTCCCCCTCGGCGAGGGCGTCCTGATGCTCCAAGATCAAGTGCTTCTCGAGATGCGGAGGATCTTTCACCACCACGGAAAAGCCGAAAGGGTAGTGGTAAAATAAGTGATGAAATTGGTGCACGACAGATGGATAAGGAAGCAGATCTTTCACCCCCTAGAAAGAGGAAGGTACAGCAGAAAACTGGTTTGATTACTGGCAAAGATGTTAGTGAAGAGATTGCTAAAACTAAGAAGGATGAATTGATGAGGTTTCAAGAGATGGACCCGTCTTCAAGTGGACGAGGTGCTGAACCTGTATATCGAATCAAGGGACAACGTGTATCAAAGGAGGAATATTTGAAGTTGACAAAGAAAGAAGAAAAGCCAAAGGAGGAGAAGAAGCTTGAGTGGGGCAAAGGGTTGGCTCAGAAACGTGAGGCTGAAGCAAGGCTTCAGGAGCTCGAACTTGAGAAAGACAAGCCATTTGCACGGTCCAGAGATGATCCTGAGCTGGATAGGATGATGAAAGATAGACTCAGGTGGGGTGATCCAATGGCACATTTGGTGAAGAAAAAGCAATCTGATGTCCTTCCTGACTTGGGTGAGAATGAGAAAATGAAAGAGTCTGGATTCGTCATCCCACAGGAGATACCAAGTCATAGCTGGTTAAAGCGAGGATTAGATTTTGAACCAAACCGATATGGCATCAGGCCTGGAAGACACTGGGATGGGGTTAATCGTAGTAATGGGTATGAAAAACAGTTGTTCAAGAGGATGAGCGAAAAGCGAGCCACTGAGAGAGAAGCTTATCTCTGGTCTGTATCTGACATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_67847.p1 GENE.R_Transcript_67847~~R_Transcript_67847.p1 ORF type:complete len:540 (+),score=161.96,Bud13|PF09736.5|2.1e+02,Bud13|PF09736.5|1.2e+03,Bud13|PF09736.5|6.8e-38 R_Transcript_67847:259-1878(+)
MMVTTTSTSTSLKEYLKKYETSTSNPEEEKKKKKKKKAKPVASGVLVVDEDPVWQKPVNLEEEEDNDSPDEKPLVDEDIEVKRMKRLEQIRARRALNAISEDGSGWVSVSDVPKRATSADPNSDMSPPRKRPARFDTPSPEPGLNHSGSGRGEGTDLSPPRPSRRRNDFPSPEPSSFQKEGSDLSPPRNRRRRHDSPSELKSRNVGEDGDLSTPRPRRRRYDSPSPERGGSDGDLFPPRRRGRSSGSPSVPEKGPSVSSVKDSDMDDLSPPRRGRPDAPRSSASRDAEDLSPPRKSRKGSGKISDEIGARQMDKEADLSPPRKRKVQQKTGLITGKDVSEEIAKTKKDELMRFQEMDPSSSGRGAEPVYRIKGQRVSKEEYLKLTKKEEKPKEEKKLEWGKGLAQKREAEARLQELELEKDKPFARSRDDPELDRMMKDRLRWGDPMAHLVKKKQSDVLPDLGENEKMKESGFVIPQEIPSHSWLKRGLDFEPNRYGIRPGRHWDGVNRSNGYEKQLFKRMSEKRATEREAYLWSVSDM*

Click here to download the sequence:
Link to NCBI Protein BLAST