Transcript Information: R_Transcript_6797.p1


Annotated TAIR IDAT1G15660.1
Annotated Gene Namecentromere protein C
Annotated Gene Symbol(s)CENP-C
Annotation TypeOrtholog
Chromosome Positionchr1:5381230-5385057 | Forward length=705
E-Value1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9323000416709
Replicate 26.2279389219808
Replicate 39.3461782932987
Condition 2: 8 Hour
Replicate 17.1404337080202
Replicate 28.6477002364535
Replicate 311.268083689251
Condition 3: 24 Hour
Replicate 113.044861678821
Replicate 29.7164594862118
Replicate 311.697183856452


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6797.p1 GENE.R_Transcript_6797~~R_Transcript_6797.p1 ORF type:5prime_partial len:799 (+),score=177.79 R_Transcript_6797:2-2398(+)
CCTCTTTTTATCGAAGCCGAACTCCCAAACACGGTGTTAGGGTCACTACAGTGCAGATACACAGACCGACGTAACTTACCGGCCACAACCTATTGTCGCCATTTTTACAGACACCTAAAATTTATGGTAAGCTCCGAGAACACTACGGGCTTGGGTCTGGATCCAATTGACCCGCTCGTCGACTACTCTTTTCTCTCTCTCTTTCCTCTCTCTTTCAAACCCCAATCACTCACTCAAGATGATCGAAACCCTAATTTACCTTCAATCGACTCTCTACACTCTCATCTCAAGTCCCTGGTACTAAAGAGCCCTGAAAAGCTTCTGAAGCAGGCAAAGATCATCCTAGGTGACAGTTTGGACCCATTAAAGACTGATAAAACATCTGATATGGCTTATCAAGATAAAGCTGAAGCAGGTTTTGCAAGGAATGGCAAGAATCCACAAGAGAAGAGACCTGCTTTGGGACTCAAGCGGGCTAAGTTTTCTGCAAAGCCAATGCCAAGACAGCCTAATGTGGTGTTGGAAACTAGTATAGACATCGATAAACTTGATGACCCTGAGGAATATTTTGCAGCCATGGAAAGGATGGAAAATGCCAAGAAAGAATTGCAAAGACTAAGAGGTGAACCGCTGATGGACTTGAACCAAAATCTTCCACCTCTCTCTCCTAGGCACCGCCGACCTAGCCTTTTGGGGAAATCAGCAACTTATAGGCACCGCTCTTACTCTTCATCAACAACAGATCAATATGGTGAGACCCTTTCATCATCTCAAAAGACTTCTGAACACCATGTACTGAGCCCATCTCGTCAGGAGATCCTATCAGCAACTAACACCATGAATTTTTCACCAAAAACAAGAGTATCTGATCCTGTTCCCATGGAGACTGGAAAACTTAGTGAGCTCGATGAGCTGTTATCTTTGGATTATGAAGGACTAGATGATGCCGATGTTGTCAATCTCCTGGGAGACAAGCTGGATATCAAAATCAGAGAAATTGGTAAGACTTCCCTTCCTGACATGTATGATGTTCAACCACGCAAATCTGTGCCTTCAGGTGAAGCCTCGTCGAAGATGAAGGATAAAATCTCCACCAATCTACATGGCATGTTGAAGTCTATGGGGGCCAGACTACTCCGTGGGGGCAGTCAGTCGAAGGATAGTGTTGTTCCATCTCAGACATCTTCTAAAAGTCCTTTGGCTTCAATCTCGTTGCTGAACAGACATATTTCAAAACTTGCCACTTTGAAAGACCCATTTTCACTCGATATCGATTCATCACCAACCAGAAGTTCTCCTCCTGAAACACAGCATCAAAGGCAATCTGATCTGGTTGATGTGAGGATGGATTTATCTGAGTCTTGTCTTAAGCATGGAGAAGAGCGTACAGCAGTTGGTTGTACTTCTGTTTCAGCTGCAATTGATGGAGAGAATGGTACGACAACCACTGTTAACCCTGAAGAACGGTTTGATGATGTTAGTCAGTCTGATCAGGCTGGTACAAGGAAGGACGTACATGAATTTGAGTTGTCTACAGTACCTGGAGAAGAAAGTGATGCAGTTTCTGGCAGGGACTGGCCCACTTCGCTTGTGAAGGTTATATCTCCCACTAGTGAACCTAAGAGATGGGAGGATGGGGTTAGTCAATTTGATCAGGTCGGGACAAGGGAGGAGTTGTGTGAACTTATGAACTCTCCAGCACATAAAGATGAAAGAATTGCAGATGAGTGTGAAGGCTCACCTGTTTTCCCAGCAAGGGATGCAGATTCCACTAGCCAGGATGATCAACGGGAGGATGAGATGGTTGAAGTACGGCATTCTGCACAACAAATTAACATTGAGGGCTTTCATATGGAGAAGTCAATTGCCAATGTTGAAGGATGTGGTGTTGGTGAAGCTTCAAATGTGGAAGATTTTTGTGCTGAAGAGCCAACCAAGGAAAAAGGTGGATCTACCAAGAGGAAATTAGGAGGGCAGAAGGTAAAGGCCCAATCTAAAGCAAAGCAATCCAAGGAACCAGTCAAGAAAGGAAGCAAAGAAACGACAATGTCAACAACACCTGTTTCAGAGAAAACTGGGAATAAGAGGAGGAAAGTAGAAGATGCTTCTCCAAAGCGGAGCAAAGAGAAAGAGCTACGGCAACGAAGGCAAAGCTTATATGACTGTGGGACAAGGTGGGAAGCTGGGATTAGGCGAAGTACCAGGATAAGGATGAGACCGCTGGAATACTGGAGAGGCGAACGATTTTTATATGGACGTGTTCACAACAGTTTGGTGACAGTGATAGGAGTAAAGTACGCTTCTCCATCAAAGGAGGCTGAAAAACCTGCAGTCAAGGTGAAGTCTTTCGTTTCCGATGAATACAAAGATTTAGTTGAAAGTGCTGCATTGCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6797.p1 GENE.R_Transcript_6797~~R_Transcript_6797.p1 ORF type:5prime_partial len:799 (+),score=177.79 R_Transcript_6797:2-2398(+)
PLFIEAELPNTVLGSLQCRYTDRRNLPATTYCRHFYRHLKFMVSSENTTGLGLDPIDPLVDYSFLSLFPLSFKPQSLTQDDRNPNLPSIDSLHSHLKSLVLKSPEKLLKQAKIILGDSLDPLKTDKTSDMAYQDKAEAGFARNGKNPQEKRPALGLKRAKFSAKPMPRQPNVVLETSIDIDKLDDPEEYFAAMERMENAKKELQRLRGEPLMDLNQNLPPLSPRHRRPSLLGKSATYRHRSYSSSTTDQYGETLSSSQKTSEHHVLSPSRQEILSATNTMNFSPKTRVSDPVPMETGKLSELDELLSLDYEGLDDADVVNLLGDKLDIKIREIGKTSLPDMYDVQPRKSVPSGEASSKMKDKISTNLHGMLKSMGARLLRGGSQSKDSVVPSQTSSKSPLASISLLNRHISKLATLKDPFSLDIDSSPTRSSPPETQHQRQSDLVDVRMDLSESCLKHGEERTAVGCTSVSAAIDGENGTTTTVNPEERFDDVSQSDQAGTRKDVHEFELSTVPGEESDAVSGRDWPTSLVKVISPTSEPKRWEDGVSQFDQVGTREELCELMNSPAHKDERIADECEGSPVFPARDADSTSQDDQREDEMVEVRHSAQQINIEGFHMEKSIANVEGCGVGEASNVEDFCAEEPTKEKGGSTKRKLGGQKVKAQSKAKQSKEPVKKGSKETTMSTTPVSEKTGNKRRKVEDASPKRSKEKELRQRRQSLYDCGTRWEAGIRRSTRIRMRPLEYWRGERFLYGRVHNSLVTVIGVKYASPSKEAEKPAVKVKSFVSDEYKDLVESAALH*

Click here to download the sequence:
Link to NCBI Protein BLAST