Transcript Information: R_Transcript_68006.p1


Annotated TAIR IDAT5G64090.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25648069-25649415 | Forward length=448
E-Value9.1E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.887918917864
Replicate 218.658382596924
Replicate 321.239009377161
Condition 2: 8 Hour
Replicate 116.988051912007
Replicate 222.64817368497
Replicate 327.829878381578
Condition 3: 24 Hour
Replicate 121.630482184561
Replicate 219.032696644331
Replicate 323.246898339831


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68006.p1 GENE.R_Transcript_68006~~R_Transcript_68006.p1 ORF type:5prime_partial len:467 (+),score=88.46,Hyccin|PF09790.5|4.9e-65 R_Transcript_68006:1-1401(+)
CCCAATAACAACAACAATTACTCTTCCTCGATTATGACCCACCGAAACCATAATCATTACCATAATAATAATAATAATAATGTTAATGGTGGTGGTGGTAATAATAATAGTGAAGATCCAATGCAGTCTTGGTGGGAATCTGTGTCCAAGGCTCGTTCCCGAATCCATTGTTTACTTTCCCTCCTTTCCCCTGATTCTTCTCATAGACATAGTTCTGATGTTAATGGGGATGGATACGGAGACGATAGTTTGTTTTTGATGTCTCTTGCAGACTCTGATAGGCCTGCTCGCTCTCTTCTTGAGTCGTTTGATGCTTACAGTGCGATTGCTGCTTCACTGTCCTCGCCTTCATCTGGGTCTGGTGATGACAGTTTGTGTCAGTGGCTTTATGATACCTTTCAGTCCTCCGATTCTGATCTCCGTTTGGTTGTTATCTCTTTCGTTCCTCTTTTGGCGGAACTTTACCTCTCTCGAGTCCACACTTCTTCTACTATTGAAATCGATGCTTCTACTCCTTCTCTTGCGGGTTTCGAAGCTGTACTCCTAGCTCTTTATGCTTTTGAAACTAGAGCGCGTGCTGGCAAACCTGTTGTCATCAATATTCCTGATCTCTCGCAGCCGTCTCTCTATCATAACCCGAACCCTAGCTTTGCTAATGGCGGCACTACCCACCGGCCTGTTACTACTAAATCCACCAGTTTCAGTGCAATGACTAAAGTCAATCAATCGCCTTTGGTTGGAGTCGTATCTCCTCCTCTAGAGCCTCAGCTTGCTATAAAATCCACCAAACGAGGTTGCATTGTCGGTGTTGCCCTTGATTCATACTATAAGCGCATCGCTCTTATGCCCTCTTGGTCCAAGATAGAGCTTTGCCGTTTTGCTGCTGCCTGGGCTGGAGCTGATTGCATTTGCGCTAATTCCTTGGACCATCACCATTCTACTGGACACGATTATTATAATAATGAGTACAATGACAATGACGATGCTCTGTCATGTTCTCTGGTCACCAATGGTGTGCTTCCCCTCGAAGACGATGTTGGTGATGATGTCGCCAGGTTGCAAATTCAGGAAAATCATATTGATTCTGATGCTAGAGGAGCTCGAATTCCCCTTCCTTGGGAGCTTTTACAGCCAGTGTTGAGGATTCTAGGGCATTGTCTATTGGGACCTCTTACTGCTCAGGATATCAAAGATGCAGCCGGTGTAGCTGTTAGGCGTCTGTATGCAAGAGCTTCTCATGATCTGTTTCCGCAGGCAATCCTGGCTACAAGAAGTCTCATTCAACTTGACAATAGAGCACGTGCTGCTGCAGAAGCTGCTGCTATTGCCAATGCTTCTTCAGCTGCCAACACACCAAGCAGCAAAACAAAGAAACCTGAGGTCCTCTTAGTTTCTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68006.p1 GENE.R_Transcript_68006~~R_Transcript_68006.p1 ORF type:5prime_partial len:467 (+),score=88.46,Hyccin|PF09790.5|4.9e-65 R_Transcript_68006:1-1401(+)
PNNNNNYSSSIMTHRNHNHYHNNNNNNVNGGGGNNNSEDPMQSWWESVSKARSRIHCLLSLLSPDSSHRHSSDVNGDGYGDDSLFLMSLADSDRPARSLLESFDAYSAIAASLSSPSSGSGDDSLCQWLYDTFQSSDSDLRLVVISFVPLLAELYLSRVHTSSTIEIDASTPSLAGFEAVLLALYAFETRARAGKPVVINIPDLSQPSLYHNPNPSFANGGTTHRPVTTKSTSFSAMTKVNQSPLVGVVSPPLEPQLAIKSTKRGCIVGVALDSYYKRIALMPSWSKIELCRFAAAWAGADCICANSLDHHHSTGHDYYNNEYNDNDDALSCSLVTNGVLPLEDDVGDDVARLQIQENHIDSDARGARIPLPWELLQPVLRILGHCLLGPLTAQDIKDAAGVAVRRLYARASHDLFPQAILATRSLIQLDNRARAAAEAAAIANASSAANTPSSKTKKPEVLLVSK*

Click here to download the sequence:
Link to NCBI Protein BLAST