Transcript Information: R_Transcript_68378.p1


Annotated TAIR IDAT5G11430.1
Annotated Gene NameSPOC domain / Transcription elongation factor S-II protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3648469-3652256 | Forward length=873
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6999245178484
Replicate 22.2131235573936
Replicate 33.0955050805611
Condition 2: 8 Hour
Replicate 12.7794765615792
Replicate 23.464929438454
Replicate 33.9246725665702
Condition 3: 24 Hour
Replicate 14.8190712468965
Replicate 23.3579628400969
Replicate 34.2197917144108


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68378.p1 GENE.R_Transcript_68378~~R_Transcript_68378.p1 ORF type:complete len:1110 (+),score=283.49,SPOC|PF07744.9|1e+04,SPOC|PF07744.9|1e-10 R_Transcript_68378:258-3587(+)
ATGCAGCCACCAAGGCCTTTTAGGGGAGCCCATTATGACAAAAACATGTTTACATTTCTTCCAGCAGCTTCTAATCGATATGTTTTGGCTGAGTCATCTAGGAAAAGAAAACTAATGGCTTCTGATCACCAAAGCACTATGCCTGCTCCAACTATCAGGCCTGGCTTTGTTGGAATGTCTGACCCTAATCTGAATACTAATGATATACTAGGTAAAGAACTTCAGAATTCTGTTCGAGCTCATCCACCTGGGGAGTCACTACATCCTAAAAATTATCCTCATGAAATTCGACAGTGGGAGCATAATAATTATTCAGCATCTTGGCATCCTAATAAGAGGGATCTTCATGAAACAACTTCTGAATATATTGGATATTCTTCTTTCAGTGGACGGCTGCAACCTCCCCATCACACAGATCCTTTCCCTTCATTTCACAGAACAGAAGGCCAAATTCATAACTTGTCAAGGTGGCCTCCATTGATGGCGGAAGACTTAAACCAGCAAGTGGAGCATGAAGCGAAGGCACATGTAGCAAGGAAAGAGCATAATCCTCATATTCAGGAATTTCAAAACGGTGTGCCAGACAAGCCTGCTGAGATGATGTTTGTAGCTTCTGCTTCTCATGAACTAGCATCTAAAGTTCGAGGGGAGTCTGAAAGGTTGCAGAAAATTTTTTTGAAGACAGGGACTTGTGTGGTGGGTTCTGATATGAAAGATTGTCCTAAAGCATCAACATGTCCTCCTCCTCTTACTGGAGACTTTAGCCAGCTCCAAAACCATCCATCAAGAGCACTTGTAGCAAAGGAAGACAACGTATCTCATTTTCAGGAATTTCAAAACTGTGGGATGCAAAAGTCTGCTCAGGTGAACGTTGTGGCATCTGATTCTTGTGAGGAAGCATCTGAAAATTTGGGGGAGTTACAAAACTTGCAGCAGAGTTTTCTTAAAACTGGGGCCTTTGTTGTGGGCGTTGAACAAAAAGGTTGTCATGAGGAAACATATGAATTTCAGCCTTGTTCTAATGTGAAAGAAAGAGGCGAGGCTTGTAGTTTTGCCAAAATTGACAGTTCTCATATGCATGGGGATAATGTCATTCATTCTGTGAACAACTTGCCATATGAACCTAATCATCTCCTCCAAAATGTACTAAGACTTCTGAGTGCTGCTTCTGGTGTTGATTTATCTGGTAGTTCTAATGGTAAAATTCACAATCATGAAGATGATAGTCAGAATGTAAAGCAATTAATGGAGACAATCTTATCCAAGACTGTTGCAGCTGGTCCTGGTCTTGATAAACCGGGTCATGTTGAATCTGCTTCTAGTCTTGATAAGACTGGTCATGCTGCTGCTGGTCCTAATCTTGATAAGCCTGATCTAAATGGTGAAAAGTGTTCTGTTAAATCAGACAAAGAATGCAAACCGGAAACTGATGCGTTGGCTCTTACTGAAAAGCTGTGGGAAGGGATCCTTCAATTAAGCTCCTCTGTTTCAGTACCAGCAATTGCACTTTTTAAAAGCGGAGAAAAGATGCAGGACTTCAGCTGGTCTGAATCTGTGGAAGTTAAAGGGAAAGTAAGACTAGAAGCTTTTGAAAAATATGTGCAAGGTCTTCCCCGCTCACGCACTCGTGGGCTTATGGTGATGTCACTTTGCTGGAAGGAAGGCTCCACTGATGCTACTCGCAAAAGCCTGGAGGAGGTTGCACGTAAATATAAAGAAGGGAAGAGGGTTGGGTTTGCACAGCGTGGTCGTATTGATATGTACATTTGTCCTAACAGTGCGACAATAATTACTATTCTCGCGAAACATGGTTTCTTCAAGGGATTGACTGCGGTTAAAGTAAAAGGCGATCCACTTATCGGGTGTGTTGTATGGCGGAAAAACACATCTTCAGTTTCTGTCAAACAGACATCCGAGGTTAATACTACACCTTCAGGGCTGTCTGTGAGTTCCCCTTCAGTCTCTTCTTCCCTGCAGGTTGCTGATGAAATCTCAACCACAGGCAACAAGAATCAGGAACCCCTAACATCATCATCTGAAAAGGATCAGAAAGTGAATAATGGTAGAGATATAGGTGGAAGACAAAATAGTCCTGAATTTTGTGTCTCTCCTCATGATCAACCTAAACAACCAACAAACAATGAAAACAAGTTGGTCTTGATCTCCGGTACTACTATGCAGATGTCAGCTTTGAAGAATGATGTGGAACTCAATAAGCCTAATGTTCCAAATCAGGGTGCAGCAGCTTCTGATGTTGATGATGATTTACCTGAATATGATTTTAGAACTGCAGTTTCTCATACTTTGACATGTAGGAGTTCTGAAGTCAAGACAATTGCTGATTCAAGAACTGAAGCTGAACAGTTTAAGGACAGTCATGTCCCAAGTCCCATGTCGGCCCGAAGGAGGTCAGAAAGTTCAAGTGTTTGTAGACTTTCATCAGATTCCCATTTCCAAGTACTTGTCCCTCAAAACATAGAGAATCAATCCAATTTTGACACCGCAACTTTGCCCATTGAGCAACAAAAGCAAATCACAGCTAGCTCAGCAATTCTAAAGCCACCAGATTTTGCCCCAAAACCTATGTCAGTACAAATGGGGGTTGAAAGTTCAACTATTTCCAGACCTCCACCAGATTCCCATTTTAAAGTGGTCCCTCAAAACATAGAGCTTCAGTCTAAATGTCATGTCCCAACTTCACCCAAAGAGCCACCAAAGCAAATCACAGCAAGTCCAAAACCAGCAGGTTTTCATTTTGAAGGACCATTTCAAGTACACAGAGGGCATCTGCCTGAAATACAATTACCAAGTTTGCCAGAAAAGAAGCAAACTGGGAACTGTACAGCTGGTCCAAAGCCAAGAAACCTCTTTGATGATGAGGATGATGACATACCAGAATGGTGCCCACCAGATTTCACAAGGCCAAATCAAGAGGTAGCTCAACAGGCTAGAGCACCATTTGCTTTAAACCACTCTAAAGTTCCCATGCCAAGCCGTCCTGTATCAGCTCCTGGCCATGCACCATTTGCTTCAAGCCACTCCAATATGCTTATGTCAGGCTCTGTTGATTCAGCATGTGGCCATCTTCCATCCCTGCCCCCAAGCCATCCTGCATCAATTTCGAGGAAGCTCCAGTTCCGAGACAAAGACCAACCCTCTGTGCCTCGTTTTCAGAAGCTGTTAGATGATAAACCAGCTTCCAACAGTTCCATTGACAATGATCCAGATGCTCCCCCAGGTTTTGCTCCCAATCCTGCTGCAATGCCTTGTGATCCTCGTCGCATGAAGGAAACCATTCATTCCCCTCATTGGAGGGGTATGAGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68378.p1 GENE.R_Transcript_68378~~R_Transcript_68378.p1 ORF type:complete len:1110 (+),score=283.49,SPOC|PF07744.9|1e+04,SPOC|PF07744.9|1e-10 R_Transcript_68378:258-3587(+)
MQPPRPFRGAHYDKNMFTFLPAASNRYVLAESSRKRKLMASDHQSTMPAPTIRPGFVGMSDPNLNTNDILGKELQNSVRAHPPGESLHPKNYPHEIRQWEHNNYSASWHPNKRDLHETTSEYIGYSSFSGRLQPPHHTDPFPSFHRTEGQIHNLSRWPPLMAEDLNQQVEHEAKAHVARKEHNPHIQEFQNGVPDKPAEMMFVASASHELASKVRGESERLQKIFLKTGTCVVGSDMKDCPKASTCPPPLTGDFSQLQNHPSRALVAKEDNVSHFQEFQNCGMQKSAQVNVVASDSCEEASENLGELQNLQQSFLKTGAFVVGVEQKGCHEETYEFQPCSNVKERGEACSFAKIDSSHMHGDNVIHSVNNLPYEPNHLLQNVLRLLSAASGVDLSGSSNGKIHNHEDDSQNVKQLMETILSKTVAAGPGLDKPGHVESASSLDKTGHAAAGPNLDKPDLNGEKCSVKSDKECKPETDALALTEKLWEGILQLSSSVSVPAIALFKSGEKMQDFSWSESVEVKGKVRLEAFEKYVQGLPRSRTRGLMVMSLCWKEGSTDATRKSLEEVARKYKEGKRVGFAQRGRIDMYICPNSATIITILAKHGFFKGLTAVKVKGDPLIGCVVWRKNTSSVSVKQTSEVNTTPSGLSVSSPSVSSSLQVADEISTTGNKNQEPLTSSSEKDQKVNNGRDIGGRQNSPEFCVSPHDQPKQPTNNENKLVLISGTTMQMSALKNDVELNKPNVPNQGAAASDVDDDLPEYDFRTAVSHTLTCRSSEVKTIADSRTEAEQFKDSHVPSPMSARRRSESSSVCRLSSDSHFQVLVPQNIENQSNFDTATLPIEQQKQITASSAILKPPDFAPKPMSVQMGVESSTISRPPPDSHFKVVPQNIELQSKCHVPTSPKEPPKQITASPKPAGFHFEGPFQVHRGHLPEIQLPSLPEKKQTGNCTAGPKPRNLFDDEDDDIPEWCPPDFTRPNQEVAQQARAPFALNHSKVPMPSRPVSAPGHAPFASSHSNMLMSGSVDSACGHLPSLPPSHPASISRKLQFRDKDQPSVPRFQKLLDDKPASNSSIDNDPDAPPGFAPNPAAMPCDPRRMKETIHSPHWRGMRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST