Transcript Information: R_Transcript_68402.p1


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value1E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76156364683214
Replicate 20.25432934555408
Replicate 30.77075160148561
Condition 2: 8 Hour
Replicate 10.42842024806755
Replicate 20.51162179179025
Replicate 31.0016366560375
Condition 3: 24 Hour
Replicate 10.98876154951081
Replicate 20.83115376707425
Replicate 31.0899664514337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68402.p1 GENE.R_Transcript_68402~~R_Transcript_68402.p1 ORF type:5prime_partial len:743 (+),score=103.58,PPR_2|PF13041.2|0.0025,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|0.0057,PPR_2|PF13041.2|4.1e-07,PPR_2|PF13041.2|7.6e+03,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|7.5e-12,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|6.1e-12,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|1.1,PPR|PF01535.16|0.17,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|5.6e-05,PPR|PF01535.16|0.015,PPR|PF01535.16|79,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.00035,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|0.0049,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|50,PPR|PF01535.16|6.8,PPR|PF01535.16|7.2e-08,PPR|PF01535.16|0.016,PPR|PF01535.16|0.47,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|0.93,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|4.5e+02,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.005,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.99,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|0.0008,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.49,TPR_14|PF13428.2|9e+03,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|8.8e+02,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|55,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|9.4e+03 R_Transcript_68402:2-2230(+)
GAAAAGGGCTGGTCTTTCCTCAAAACCGCTATTTTTTCAATTTTCAACGCTGGGAAAGACACTGAAAAAGCCGCCAATTTACGAATGTTAACGAGAACTCTCATCCTTGGAAGTTGGAAACACAAACGCTGGAAGAATTCCATAAAAAGTTTCTCAACTCTTTATCAAAACCTATCAGCCCAACTATACGATACATTCGCCATCAATACTGAGATAACTAGGCATGCGAAAGAGGGTCAATTGGAGTTTGCCCATCAACTGTTCGACGAAATGCCGAAACGAACTGTTGTTACCTGGAACACCATGCTTACAGGGTATTCTAAATGGGGTTCGTACAATGAAGCACTTAGTCTCGTTTATGATATGCATCGTAGCTCCATGAAGCTTAATGAGACCACATTATTGACCACATTGAGTGTGTGTGCTCATTCTCAGTCCTTAAGGGACGGCAAACAGCTGCATTCCCTTGTTTTGAAATCAGGGTTTCAGAGTTTCCATCTTGTAGGGAGTACATTGTTGTATTTTTATGCAAGTTGTTATCGAATCCAAGAAGCGAGGACTGTGTTTGATGAGTTGTATGGAAGTAATCCTATGATTTGGAGTTCATTGTTGGTGGGTTATGTGCAGTGTAACATGATGGATGATGCTTTGGAGGTTTTTATGAGAATGCCTTCTAAGGATGTTCGGGCTTGGACTACATTGATTTCAGGGTATTCGAGGCTTGATGGAGGTTTCGAGAAGGCATTGCTGCTGTTTAAAACGATGAGAGAGAATGGTGATGTAATACCTAATGAGTTTACCTTGGATTGTGTTTTAAGGGCATGTGGGAGACTTGGATTTTTGCACGAAGGACAGAGTGTTCATGGAGTTGCTGTTAAATGTGGGTTTGAATATGATCAGTCTATTGGAAGTGCACTAATTGATTTGTATTTTAGTTGTCAAGTTGCTGATGAGGGTAAACGAGTTTATGATGAACTAGGTAGTCCATCTTTAAATGTTTCAAATTCACTTATTGGCGGATACATTTCAATGGGAAAGATCGACGATGCTGAGCTAGTTTTCAATCAGATGGCGGAGAGAAATCCAGTGTCATATAACCTGATGATCAAAGGGTATGCCATGTGTGGGAGGACTGATGCTTCAAAAGAATTTTTTGAAAAAATGCCTCTAAAAACTATTGTTTCCATCAACACCATGATTTCAGTGTACTCTGAAATTGGTGAAGTTGACAATGCTTTGAAACTTTTCGAATCAGCAAGAGGCGAGAGGAACACAGTTACATGGAATTCTATGATTTCAGGTCACATACAAAATGGCCAGCATGAAGATGCTATAAAACTGTACATAGTGATGCACAGATTGTCAATAGAAAGAACAAGGTCTACATTCTCTTCCCTATTTCATGCTTGTGCATGCCTTGGATCTCTTCATCGGGGGATATCGGTTCATGCTCATTTGATTAAAACACCTTTCCAGACTAATGTCTATGTCGGGACATCTCTAGTAGATATGTATGCCAAATGTGGGTGCATTTCTGATGCCCAGTCGTCGTTTGATTGCATCTTTATACCCAATGTTGCTGCATGGACAGCATTAATTAATGGTTATGCACACCATGGTCTTGGGTCCAAGGCATTTGCACTCTTTCAGGAGATGTTAAAACAAGGAATACACCCCAATGGAGCTACCTTTGTTGGAATATTGTCTGCCTGTGGACGTGCTGGCTTGGTGGAGGAGGGGTTGCAAATTTTCCACTCAATGAATAACTGCTATGGTGTAACTCCAAATTTAGAGCACTATGCTTGTGTGGTGGATCTCCTTGGCCGAGCAGGTCATCTGCAAGAAGCTGAACAGTTCATCAGAGACATGCAGATGGAGGCTGATGCTGTTGTTTGGGGAGCTTTACTTAGTGCTTCTTGGTTTTGGATGAATATGGAAATTGCGCAGAGGGTTGCTGAGAAACTAATTACATTGAACCCTAATTCAACATATGCACTTATCATTTTATCTAACATTTGTGCCAGGTTTGGGAAGTGGGGAGATAAAATGAGACTGCGGAAGAATTTGAGAGGCTTAGAGGAACAGAAGGATCCTGGCTGTAGTTGGATTGAACTGTACAATAAAATTTATTCATTCTACGTTGAAGATAGATTTCGTCCACATTGTGATTTAATGTGTACAACCTTGGATAGCCTGACAAAAAAATGTGAACCAGTTTGCTGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68402.p1 GENE.R_Transcript_68402~~R_Transcript_68402.p1 ORF type:5prime_partial len:743 (+),score=103.58,PPR_2|PF13041.2|0.0025,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|4.3e+03,PPR_2|PF13041.2|0.0057,PPR_2|PF13041.2|4.1e-07,PPR_2|PF13041.2|7.6e+03,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|7.5e-12,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|6.1e-12,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|1.1,PPR|PF01535.16|0.17,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|5.6e-05,PPR|PF01535.16|0.015,PPR|PF01535.16|79,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.00035,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|0.0049,PPR|PF01535.16|7.3e-07,PPR|PF01535.16|50,PPR|PF01535.16|6.8,PPR|PF01535.16|7.2e-08,PPR|PF01535.16|0.016,PPR|PF01535.16|0.47,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|5.2e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|8.7,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|0.054,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|0.93,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|4.5e+02,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.005,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.99,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|0.0008,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.49,TPR_14|PF13428.2|9e+03,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|8.8e+02,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|55,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|9.4e+03 R_Transcript_68402:2-2230(+)
EKGWSFLKTAIFSIFNAGKDTEKAANLRMLTRTLILGSWKHKRWKNSIKSFSTLYQNLSAQLYDTFAINTEITRHAKEGQLEFAHQLFDEMPKRTVVTWNTMLTGYSKWGSYNEALSLVYDMHRSSMKLNETTLLTTLSVCAHSQSLRDGKQLHSLVLKSGFQSFHLVGSTLLYFYASCYRIQEARTVFDELYGSNPMIWSSLLVGYVQCNMMDDALEVFMRMPSKDVRAWTTLISGYSRLDGGFEKALLLFKTMRENGDVIPNEFTLDCVLRACGRLGFLHEGQSVHGVAVKCGFEYDQSIGSALIDLYFSCQVADEGKRVYDELGSPSLNVSNSLIGGYISMGKIDDAELVFNQMAERNPVSYNLMIKGYAMCGRTDASKEFFEKMPLKTIVSINTMISVYSEIGEVDNALKLFESARGERNTVTWNSMISGHIQNGQHEDAIKLYIVMHRLSIERTRSTFSSLFHACACLGSLHRGISVHAHLIKTPFQTNVYVGTSLVDMYAKCGCISDAQSSFDCIFIPNVAAWTALINGYAHHGLGSKAFALFQEMLKQGIHPNGATFVGILSACGRAGLVEEGLQIFHSMNNCYGVTPNLEHYACVVDLLGRAGHLQEAEQFIRDMQMEADAVVWGALLSASWFWMNMEIAQRVAEKLITLNPNSTYALIILSNICARFGKWGDKMRLRKNLRGLEEQKDPGCSWIELYNKIYSFYVEDRFRPHCDLMCTTLDSLTKKCEPVCCT*

Click here to download the sequence:
Link to NCBI Protein BLAST