Transcript Information: R_Transcript_68535.p1


Annotated TAIR IDAT5G45130.1
Annotated Gene NameRAB Homolog 1
Annotated Gene Symbol(s)ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, ATRAB-F2A,
Annotation TypeOrtholog
Chromosome Positionchr5:18244495-18246060 | Forward length=200
E-Value8.8E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1113.02085924487
Replicate 2130.43156319216
Replicate 3132.6971112262
Condition 2: 8 Hour
Replicate 1123.54231859746
Replicate 2157.31670911501
Replicate 3126.51122553603
Condition 3: 24 Hour
Replicate 197.396757935714
Replicate 2140.46303768191
Replicate 376.717510367206


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68535.p1 GENE.R_Transcript_68535~~R_Transcript_68535.p1 ORF type:complete len:198 (+),score=37.59,Ras|PF00071.18|1.3e-57,Roc|PF08477.9|1.7e-31,Roc|PF08477.9|2e+03,Arf|PF00025.17|1.4e-12 R_Transcript_68535:212-805(+)
ATGGTGGGCAACAAGAATATTCAAGCCAAATTGGTGCTTCTTGGGCATATGGGCACAGGAAAAACAAGCTTAGTACTGAGATTTGTCAAGGGCCAATTCTTTGATTACCAGGAATCGACAATTGGAGCAGCGTTTTTCACAGAGGTAGTGTCCCTAAATGAAGGTGCAATTAAGTTTGATATATGGGATACAGCAGGTCAAGAACGATACCACAGCTTGGCTCCTATGTACTACCGTGGAGCTGCTTCAGCTGTTGTTGTCTATGACATCACTAGTTTGGAATCATATGAGAAAGCCAAAAAGTGGGTTATGGAATTGCAGCTACAAGGGGGTCCTCGAGTCGTTACTGTGCTGGTGGGAAACAAAGCAGACCTCAATGAGAAGAGGCAGGTCAAAACTGAGATAGCTGAACAATATGCTAAAGAAAACGGATTGCATTTCTTTGAAACATCTGCCAAGACAGCCCAGAATGTCAACGAGCTCTTCTTCGACATTGCAAGGACATTAATAAGAACTTTTCCATCACGTCCAATGGGAATGAAGTTGCAATCCAGACGACAACGCAGAAGGGGACTGTTCTGTTGCTCTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68535.p1 GENE.R_Transcript_68535~~R_Transcript_68535.p1 ORF type:complete len:198 (+),score=37.59,Ras|PF00071.18|1.3e-57,Roc|PF08477.9|1.7e-31,Roc|PF08477.9|2e+03,Arf|PF00025.17|1.4e-12 R_Transcript_68535:212-805(+)
MVGNKNIQAKLVLLGHMGTGKTSLVLRFVKGQFFDYQESTIGAAFFTEVVSLNEGAIKFDIWDTAGQERYHSLAPMYYRGAASAVVVYDITSLESYEKAKKWVMELQLQGGPRVVTVLVGNKADLNEKRQVKTEIAEQYAKENGLHFFETSAKTAQNVNELFFDIARTLIRTFPSRPMGMKLQSRRQRRRGLFCCSG*

Click here to download the sequence:
Link to NCBI Protein BLAST