Transcript Information: R_Transcript_68583.p1


Annotated TAIR IDAT2G42700.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17778464-17782034 | Forward length=867
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.430170279781
Replicate 215.452884652182
Replicate 317.099772574698
Condition 2: 8 Hour
Replicate 116.018790152403
Replicate 219.43515898346
Replicate 324.788823382281
Condition 3: 24 Hour
Replicate 117.111075947751
Replicate 214.377143061848
Replicate 319.356299588763


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68583.p1 GENE.R_Transcript_68583~~R_Transcript_68583.p1 ORF type:complete len:856 (+),score=197.16,Sec1|PF00995.19|0.0024,Sec1|PF00995.19|2.5e-05 R_Transcript_68583:185-2752(+)
ATGTCAACTATAGATGTAATCAAGTCCTCTCTTGATTGTATTCTTCAGATATCAGAGCACCTCAAGGGAGCTGTTGTGTACCTTGATGCTGGATGCACAGAGAGTTTCCAATTTCTTGGAGCATTTCCTTTGTTGTTGGAACATGGAGCACGCGCTGTTTGCTGCTTGGAGAACATGTCTTCCCTTGATGTGGTTGCTGATTGGAATGGAAGCTCCGAATTAGCAAAGAAAGTCGTGGTTATGACATCATCCCTTTTAAGTGATTCCCACCGGTATATCTTACGCTGCCTCAGGTCACAGCCAAGTGTACAGTGCTGTTACATATTCACATCTATCTCAGAGATGGCACACTCAGCATATCCTGATTCACCCCTGGGTCCAGATGCATTTCGGGAGTATGAATCATTGTTGATCCAAGATTATGAGGAACTTGCAAATAAGCGCAGGACAAAATCTGAACAGTTGGGTGGAAAAGTGGTGTCAGAAGATTTGACCTTTGAAGAGGAAGGATGGGCAGAGCTTGATGAGACAGACATTTCTCGTGTGGTCACTAGTTCTACTTCAGAATCTGTCTATGAAGAGAATCCTAAGGATAAAGAACAAAAGTTCCTGGTGTCAGTTCAGCACATGCCTATGATATTATGTCCTTTATCACCAAAAGTTTTTGTTTTACCTTCAGGGGGATTAGTTGCACAAGCTTCGTTGTCATCTGAGCATGAGGATTCACTCAGCCCTGGTTTGCCTCCTCTCAGCAAGGGAGTAGCTTCTGATGGTGAAGATGTTGCCCCTGGGGCAACTTTTACAGCTCATTTTCTCTACCATCTGGCTTCTAAGATGGATCTAAAGTTGGAAATATTTTCCTTTGGGGACCTATCCAAAACAATTGGAAGGATGTTAACAGACATGTCAAGTCTGTATGATGTAGGACGACGCAAAAGATCAGCTGGTTTATTGCTGATTGATCGCACTGTGGATCTTCTGACCCCCTGTTGTCATGGTGATTCATTCTTTGATCGCATATTCTCTGCATTGCCTCGTAAAGGAACATCAGTATTCCCCGCACATGCAAAAACCTCACAAGCTCATGCAAAGTCTGGTTCTTCTCGCTTACAGCGTGCATCTCTTGATGTTCAGGTACCACTTGGCAATGTTGTTGATAAAGATTCAAGAGCTGATAACTTTCAGTTACTTGAGGGCATTGAATCTCTTCTTTGTGGGTGGGCTTCTAGCAGTTCTGCTTCAAAGATTCAGGACCTAGTTAACCTAGGTGCCAAAATTCAAGATGAGAAGTCCTTTAACTCCCTAGGTCATCTGTTTAATGGTTCATTTGTAGCTGCTGAGAATTTTCGTGGAACACCTTATTTGGAGGCTGTATTGGATAGAGGAATGAAGGATGGGGCAGTACTTGTTAAAAAGTGGCTCCAAGAAGCCTTGCGCAAGGAAAAGATATCGGTGAATGTGAAAGCTCGTCCGGGGTCTGCTACAAAGTCAGAGTTGGAACCTATGGTAAAGGCTCTGGTGAAAAGCGATTCCTCTTTACTAAGAAACAAAGGTATCATTCAGTTAGCTTCAGCAGCACTGGCTGCTTTGGATGAATTACATGGCGACAAATGGGATGCATTTATCAGTGCAGAGAAAATGTTACATGTTTCTGCTGGTGACACAAGTCAAAGTCTTTCTGCTCAAATAGGTGATTTGATTAACAAAAGCATTTTAGCTGGATCTCAAGGTGGAAAATCCAACTATTCCCACGGATTAATTTCTTTTAAAGATGCCTTACTCCTGACAATCATCGGATATATCCTGGCGGGTGATAATTTTCCGACAACAGGATCAACAAGTCCATTCTCTTGGCAGGAGGAACATTTATTGAAAGAAGCTATTGTTGATGCTATTTTTGAGAATCCAGAATTAGCAAAACTCAAGTTTGCTCATGGTCTTGCTGAGGAGCTTGAGGCATACAGGAATAAGGTCAGTTTACAAGAAAAGAAGCCGAAGGAAGAATTATCAATTGATGATTTTGATGACGATCAGTGGGGTAACTGGGGTGATGAAGATGCTGACAATGCTAGTAATAAAGACCAAATATATGATGACATGCAGCTTAAACTAGAGTTGCGTGACAGGATTGACAATCTTTTTAGATTCTTGTACAAATTATCTGGTTTAAAGAGTAGATATAAACCATTGAGGGAAGGCCCCTTTGCCTCAGAAATTGGTATTGGAAGTGATTCCTATGAAAGTAAAGGATTGCTGTACAAGTTATTAGTGACGGCATTGGACAAACAGGAAGTACCTGGCTTAGAGCATCATTCTTCAGCTGTGGGGAGACTTTTTAAAAGTGGGTTTGGAAGATTTGGTCTTGGCCAGGCAAAACCTAGTCTTGCAGACTACAATGTTATCCTCGTTTTTGTTGTAGGAGGCATCAATGGCCTAGAGGTACGTGAAGCTCTCGAGGCATTGTCTGAAAGTGGGAGGCCAGATATTGATCTTATCGTTAGTGGCACAACACTTCTAACCCCTGATGACATGTTTGAGTTATTGCTGGGTAACTCCAGTTACTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68583.p1 GENE.R_Transcript_68583~~R_Transcript_68583.p1 ORF type:complete len:856 (+),score=197.16,Sec1|PF00995.19|0.0024,Sec1|PF00995.19|2.5e-05 R_Transcript_68583:185-2752(+)
MSTIDVIKSSLDCILQISEHLKGAVVYLDAGCTESFQFLGAFPLLLEHGARAVCCLENMSSLDVVADWNGSSELAKKVVVMTSSLLSDSHRYILRCLRSQPSVQCCYIFTSISEMAHSAYPDSPLGPDAFREYESLLIQDYEELANKRRTKSEQLGGKVVSEDLTFEEEGWAELDETDISRVVTSSTSESVYEENPKDKEQKFLVSVQHMPMILCPLSPKVFVLPSGGLVAQASLSSEHEDSLSPGLPPLSKGVASDGEDVAPGATFTAHFLYHLASKMDLKLEIFSFGDLSKTIGRMLTDMSSLYDVGRRKRSAGLLLIDRTVDLLTPCCHGDSFFDRIFSALPRKGTSVFPAHAKTSQAHAKSGSSRLQRASLDVQVPLGNVVDKDSRADNFQLLEGIESLLCGWASSSSASKIQDLVNLGAKIQDEKSFNSLGHLFNGSFVAAENFRGTPYLEAVLDRGMKDGAVLVKKWLQEALRKEKISVNVKARPGSATKSELEPMVKALVKSDSSLLRNKGIIQLASAALAALDELHGDKWDAFISAEKMLHVSAGDTSQSLSAQIGDLINKSILAGSQGGKSNYSHGLISFKDALLLTIIGYILAGDNFPTTGSTSPFSWQEEHLLKEAIVDAIFENPELAKLKFAHGLAEELEAYRNKVSLQEKKPKEELSIDDFDDDQWGNWGDEDADNASNKDQIYDDMQLKLELRDRIDNLFRFLYKLSGLKSRYKPLREGPFASEIGIGSDSYESKGLLYKLLVTALDKQEVPGLEHHSSAVGRLFKSGFGRFGLGQAKPSLADYNVILVFVVGGINGLEVREALEALSESGRPDIDLIVSGTTLLTPDDMFELLLGNSSYF*

Click here to download the sequence:
Link to NCBI Protein BLAST