Transcript Information: R_Transcript_68601.p1


Annotated TAIR IDAT1G30240.2
Annotated Gene Nameunknown protein; Has 169 Blast hits to 168 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 68; Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10641241-10645838 | Reverse length=827
E-Value6.9E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4225235793371
Replicate 23.537922867504
Replicate 34.263478693557
Condition 2: 8 Hour
Replicate 13.8023204378431
Replicate 25.0484369795628
Replicate 35.3575238394975
Condition 3: 24 Hour
Replicate 15.7141678782611
Replicate 25.1737556648601
Replicate 36.026350409388


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68601.p1 GENE.R_Transcript_68601~~R_Transcript_68601.p1 ORF type:complete len:908 (+),score=196.81,RIX1|PF08167.8|1.1e-43,RIX1|PF08167.8|1.5e+03 R_Transcript_68601:109-2724(+)
ATGGCAGCCTTCGATCATTTCCGAGACATAAACGACATTACTCTAAAACCTCGTCTCCTCCATTCCCTTCTCAAACAGCACCTTCCTGATGACAAAAAACAACGTTCCTTTCAAAACCCCTCTCAACTTCCCTCCGTTATTTCTACCCTCAAAACTCACCAGCTTCTCTCTGAAGTAATCCCCAATTATTCCGACCATAAGCACGCTTCTTCTTGGTCCTCCGCCATCGACGCTTGGGTCGACCGCGTTCTGTCGCTCGTTAAATCCAATTTGCCAGATAGATGTTGGGTTGGGGTTTGCTTGCTAGGAGTTACTTGCACTGAATGCAGCTCTCAACGTTTCTTGGCTTCTTATTCGGATTGGTTTAATATGCTCCTTTCCCATATTCAGCCATCTGGAGTTTCAAAGTTTGTGAAGGTAGCTTCTTGTGCTGCTATATCCGATTTGTTGACCAGGCTTGGTGGCTTCTCAAACTTAAAAAAGGATGGCACCTCTCATGCTAGCAAACTTGTACAGCCAATTCTGAAGATGTTAAATGAGGATGGCAATGAGGCTGTGCTGGAAGTAGCAGCTCATTCACTATCAACCATCTTAACTTACTTCCCATCAGCAGTTCTTCGTCATCATGACAATGTGGAAGGTGCAATTGTTTTAAAAATCATGTATGGAAGCTGCAGTGCCAATTCATTGAAGATTCTGGCATCTTGCCTAGGATCACTTCCAAAATCCAAGGGGGATGAGGAGAGCTGGTCTTTGATGATGCAAAAAATATTATTATCTGTTAGTTCTCTTTTGAATAATGCCTTGGAAGGTCTTGAGGAAGAGTCAAGACGTGATGAGGCTATTAGATTGTTGATTCCTCCGGGAAAAGACCATCCACCATCCTTGGGGGAGCAAACAATGGCAGGAGAGGCATCGATCAAAGAAGAAAGGTCCCAGCAAGGGCTAGTGTCCACTATATCCTCACTGTTGGAAAGTTGTTGTACGATGCTCACAAGTTCTTATCCTGTTCAGGTAGCAGTCCCTGTTCGTCCATTATTGGCTATAATTCGAAGGTTATTGATCGTGAATGGGTCTTTGCCAGAAACCTTGCAGGCATTTACAACTGTAATGCAGCAAGAATATGTCTGCTCACAACTTCCTCTTCTTCAGCTTTATGTATTGGACCTTCTTGAAGCACTTGTGAACGGAATACGCTGCCAACTCTTACCTTACGCAGCTGACATTGTCCGTATTCTAATGGGGTATTTGAAGAGATGTCGGTTGCCACAGCTTAGGACCAAGGCTTATGCAATCATTAGAGTTCTACTGATTTCCATGGGTAGTGGATTGGCTTTATTCATCTCCCAGGAACTGATTAACAATTTGTACATTGATCTAAATGCTGCTGATTCTGGAAGCAGAGCAGTAGCTGTTAGTGAGGAGTCCATTCTTGAAGCAACTTTGCAGTGTCACCCTAAGAAGAGGAAGCATGCTGGTGCAGCTGGGCCATCATTGGAACAGCAGGCTTCATATGGTTCAGAAGTAAAGGCATCGAAAGAGTGCCCAACATCTGTCGCTTTGAAAAAGACAGCTGTAGAAGCATTGGAGGCTCTTCTTGTGGTGGGTGGTGCTTTGAAATCTGATGGTTGGCATAGAAGAATCGAACAACTTTTGATAGAAGTTGCAACAGATGCTTGCAGAGGGCTTTTGGAACATGATGGGAAGCATTTGCTCCGTAATGAACCTTGTGAGGATTTCCAGCTTGTGGCCTTGCATGCACTTTTGGCTTCTCTTCTTTCCCCATCTGGTGTTCGGCCACTGTATCTTGCTCAGGGTCTTGAGCTCTTTCGTAAAGGTAAGCAAAGCACTGGTACAAAGGTTGCCGAATTCTGTGCTCAAGCTCTTCTGGCCTTGGAAGTGCTCGTACATCCCAGGGCACTTCCTCTAATAGATATGTCGTTGGTAAATGGAAATGGCTTGATAGGGAGGACAGATTTTGGCAGTTCAAAATACAAGTCACCTCATGAAGATGTCAAGTTCAGAACAGCATATGGCAATCGTCATGATGTTTACGACTTCATGAATGATATGTACCTGGAAAGAGGTTCTGAAGGTGAAGTTGGGGCAGGTGCAGGTGATAAAAATCCACATTTAGATGGTAAGCGGACTGACGTTTCCAGGAAACAGAGCTTTGAAGAGCCTAATGTTATAAATGGCTCATCTGATAAGATGATTCCAGAGAAAGGAGATGAGGGTCCAGCACAAGTGAACCATTTCATCGAAATTGAAACAAATGGTGACAGTGTAATGCTGGATCCTGAACATCATGAAGAGCCTTGTGATGCGTCTCAAGAGCCCCGCACCTGTGATGATGTCCCTGCTTTTGCTCTGATTCCTAATAAAACTGTATCGGAGGCTGGCGCATTGGAATCCGTGAACCGTGCTTTGTCATCTGGAGAAAGTGTCCTTGCTACTAAGGGAATTCCATCTGCTAAAAGGACTGAAGGCTTGGCAACTTCTGGAAAAGAAAAATCAGGGAAGATATCAGGAGTAGAACCGGATACAGATTCAGATTCTGATTCAATTCCCAATATTGTAGATGCAGATCCAGATACAGATTCAGATGCCGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68601.p1 GENE.R_Transcript_68601~~R_Transcript_68601.p1 ORF type:complete len:908 (+),score=196.81,RIX1|PF08167.8|1.1e-43,RIX1|PF08167.8|1.5e+03 R_Transcript_68601:109-2724(+)
MAAFDHFRDINDITLKPRLLHSLLKQHLPDDKKQRSFQNPSQLPSVISTLKTHQLLSEVIPNYSDHKHASSWSSAIDAWVDRVLSLVKSNLPDRCWVGVCLLGVTCTECSSQRFLASYSDWFNMLLSHIQPSGVSKFVKVASCAAISDLLTRLGGFSNLKKDGTSHASKLVQPILKMLNEDGNEAVLEVAAHSLSTILTYFPSAVLRHHDNVEGAIVLKIMYGSCSANSLKILASCLGSLPKSKGDEESWSLMMQKILLSVSSLLNNALEGLEEESRRDEAIRLLIPPGKDHPPSLGEQTMAGEASIKEERSQQGLVSTISSLLESCCTMLTSSYPVQVAVPVRPLLAIIRRLLIVNGSLPETLQAFTTVMQQEYVCSQLPLLQLYVLDLLEALVNGIRCQLLPYAADIVRILMGYLKRCRLPQLRTKAYAIIRVLLISMGSGLALFISQELINNLYIDLNAADSGSRAVAVSEESILEATLQCHPKKRKHAGAAGPSLEQQASYGSEVKASKECPTSVALKKTAVEALEALLVVGGALKSDGWHRRIEQLLIEVATDACRGLLEHDGKHLLRNEPCEDFQLVALHALLASLLSPSGVRPLYLAQGLELFRKGKQSTGTKVAEFCAQALLALEVLVHPRALPLIDMSLVNGNGLIGRTDFGSSKYKSPHEDVKFRTAYGNRHDVYDFMNDMYLERGSEGEVGAGAGDKNPHLDGKRTDVSRKQSFEEPNVINGSSDKMIPEKGDEGPAQVNHFIEIETNGDSVMLDPEHHEEPCDASQEPRTCDDVPAFALIPNKTVSEAGALESVNRALSSGESVLATKGIPSAKRTEGLATSGKEKSGKISGVEPDTDSDSDSIPNIVDADPDTDSDAE*

Click here to download the sequence:
Link to NCBI Protein BLAST