Transcript Information: R_Transcript_68679.p1


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value1.1E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.649500949194
Replicate 245.249888528206
Replicate 351.288041410253
Condition 2: 8 Hour
Replicate 162.882986499739
Replicate 267.035767364561
Replicate 374.813556561176
Condition 3: 24 Hour
Replicate 1105.35563945795
Replicate 261.542032669514
Replicate 3120.6806359047


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68679.p1 GENE.R_Transcript_68679~~R_Transcript_68679.p1 ORF type:complete len:477 (+),score=60.11,Glyco_hydro_28|PF00295.13|9.1e-38,Pectate_lyase_3|PF12708.3|3e-11 R_Transcript_68679:180-1610(+)
ATGAAGTTAAAAATGAAATCATTCCACATGTTGGCAATGGGGTTGCTCTTGCTAAGCAATTTTCTAACGGAAACTGAAGGGCGACAAAATGGGGGTAAAAGTTTGGTAAATGTGGAATACAGGGCGATTAGCTGTAGAAAGCACAGTGCATTGGTAACAGAATATGGGGCCAAAGGAGATGGCAAGACTTTAAACACAAATGCCTTCAAATCAGCGATCAAACACCTAAGCAAGTTAGCCCCAGATGGTGGGGCCCAGCTGATAATACCACCGGGCAGGTGGTTAACAGGGAGTTTTTCTCTCATCAGTCACTTCACTCTGTATCTCCACAAGGATGCCGTTCTTCTTGCTTCTCAGGATGAGAAAGACTATCCAATACTTCCACCTTTGCCATCATATGGTAAAGGCAGAGACGCCCCTGCTGGCCGTTATGCTAGTCTCATCTTCGGAACCAACCTTACTGATGTGATCATTACAGGTAACAATGGGACGATTGATGGGCAGGGGGAACCTTGGTGGAAGAAATACAAGAGTAATCAGCTTACTGAAACCAGGCCTTACATGATTGAGCTTATGTACTCTAATGGAATCCAAATCTCTGATCTCACCTTGCTTGATTCCCCTAATTGGAATGTTCATCCAATCTATTGCAGGGATGTCATTATCCAAGGGCTGACCATCCTTGCACCAACTCATTCTGCTAACACCGATGGGATTGATCCAGATTCATGCACAAATGTTCGGATAGAGAACAATTACATAGTCTCAGGGGATGACTGCATAGCAATCAAGAGCGGGTGGGATGAGTACGGCATTCGCTTCAACATGCCCACCCAAGACGTGGTCATCCGTCACCTCACGTGCATCTCTCCGACAAGCGCCACCATCGCGATCGGAAGTGAGATGTCGGGTGGGATACGGAACATCCGAGCTGAGCACATAACGGCCATCAACACTGAGTCAGGGGTTCGAGTCAAGTCCTCCCCAGGCCGAGGGGCCTTTGTTAAGGACATCTATGTAAGGAGGATGACTATGAAGACAATGAAGTATGTGTTTTGGATGACTGGGTATTATGGATCCGAAAGAGTCCACCCGGATCTGAACTACAACCCGAAGGCCCTACCCGTGATCGAGGGGATCAACTATAGGGACATGGTGGCGGAGAATGTAAGCATGGCAGGGTATATGGAAGGGATAAAGGGAGATGAGTTCAAGGGGATATGCATATCAAATGTGACAATTGGGCTGGCCCCAAAGCCCAAGGAGATGCAATGGAATTGTACCAATGTTGAAGGGATTACGAGCAGGGTTAGTCCTAGGGCTTGTGGAAGGCTAAGGGAAGCCAATGTTGTGGGGTGCCCCTTCCCTGAGGATAGGTTGCCTATTGAACAAGTGCAGCTTAGAGTTTGCATGGTTCCTTCTCTTGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68679.p1 GENE.R_Transcript_68679~~R_Transcript_68679.p1 ORF type:complete len:477 (+),score=60.11,Glyco_hydro_28|PF00295.13|9.1e-38,Pectate_lyase_3|PF12708.3|3e-11 R_Transcript_68679:180-1610(+)
MKLKMKSFHMLAMGLLLLSNFLTETEGRQNGGKSLVNVEYRAISCRKHSALVTEYGAKGDGKTLNTNAFKSAIKHLSKLAPDGGAQLIIPPGRWLTGSFSLISHFTLYLHKDAVLLASQDEKDYPILPPLPSYGKGRDAPAGRYASLIFGTNLTDVIITGNNGTIDGQGEPWWKKYKSNQLTETRPYMIELMYSNGIQISDLTLLDSPNWNVHPIYCRDVIIQGLTILAPTHSANTDGIDPDSCTNVRIENNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIAIGSEMSGGIRNIRAEHITAINTESGVRVKSSPGRGAFVKDIYVRRMTMKTMKYVFWMTGYYGSERVHPDLNYNPKALPVIEGINYRDMVAENVSMAGYMEGIKGDEFKGICISNVTIGLAPKPKEMQWNCTNVEGITSRVSPRACGRLREANVVGCPFPEDRLPIEQVQLRVCMVPSLA*

Click here to download the sequence:
Link to NCBI Protein BLAST